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OPENSEQ.org
L27 - S03
UniProt: P60493 - P80372
Length: 324
Sequences: 1031
Seq/Len: 3.50
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cC 3v2d0 3v2eC 3v2f0Contact Map
2j002j00C 2j010 2j02C 2j030Contact Map
4juw4juwC 4jux0Contact Map
4kix4kixW 4kiyC 4kizW 4kj0C 4kj1W 4kj2C 4kj3W 4kj4CContact Map
4kj54kj5W 4kj6C 4kj7W 4kj8C 4kj9W 4kjaC 4kjbW 4kjcCContact Map
3uyd3uydF 3uye3 3uyfF 3uyg3Contact Map
4gd13r8sW 3r8tW 4gd1C 4gd2CContact Map
3knh3knhC 3kni0 3knjC 3knk0Contact Map
3ohc3ohcC 3ohdC 3ohj0 3ohk0Contact Map
3f1e3f1eC 3f1f0 3f1gC 3f1h0Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
83_P 100_A 1.12 0.06
8_G 87_L 0.93 0.04
7_L 80_G 0.92 0.03
64_D 101_L 0.89 0.03
60_F 158_G 0.88 0.03
27_E 169_A 0.87 0.03
23_V 126_R 0.85 0.03
35_N 176_H 0.82 0.02
60_F 52_L 0.80 0.02
49_K 41_G 0.80 0.02
2_A 162_Q 0.78 0.02
32_R 202_I 0.76 0.02
27_E 72_K 0.76 0.02
83_P 209_G 0.74 0.02
8_G 109_P 0.74 0.02
6_G 97_K 0.73 0.02
71_D 142_M 0.72 0.02
63_V 53_A 0.72 0.02
6_G 152_I 0.72 0.02
3_H 103_V 0.71 0.02
1_M 72_K 0.71 0.02
44_R 8_I 0.70 0.01
9_S 53_A 0.69 0.01
46_K 66_V 0.69 0.01
75_L 15_T 0.69 0.01
31_V 187_A 0.68 0.01
11_R 110_N 0.68 0.01
82_R 118_Q 0.67 0.01
47_P 38_R 0.67 0.01
79_V 8_I 0.67 0.01
1_M 140_R 0.67 0.01
20_R 51_G 0.66 0.01
49_K 89_E 0.66 0.01
45_F 30_R 0.66 0.01
68_E 208_I 0.65 0.01
38_V 126_R 0.65 0.01
46_K 170_Q 0.65 0.01
7_L 135_K 0.64 0.01
38_V 92_A 0.64 0.01
25_R 17_D 0.64 0.01
1_M 172_R 0.64 0.01
10_T 94_L 0.64 0.01
3_H 167_W 0.63 0.01
46_K 149_A 0.63 0.01
53_M 60_A 0.63 0.01
73_G 97_K 0.62 0.01
1_M 151_V 0.62 0.01
44_R 27_K 0.62 0.01
18_A 51_G 0.62 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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