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OPENSEQ.org
L21 - S09
UniProt: P60492 - P80374
Length: 229
Sequences: 1250
Seq/Len: 5.56
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cI 3v2dV 3v2eI 3v2fVContact Map
2j002j00I 2j01V 2j02I 2j03VContact Map
4juw4juwI 4juxVContact Map
4kix4kixR 4kiyI 4kizR 4kj0I 4kj1R 4kj2I 4kj3R 4kj4IContact Map
4kj54kj5R 4kj6I 4kj7R 4kj8I 4kj9R 4kjaI 4kjbR 4kjcIContact Map
3uyd3uydL 3uye2 3uyfL 3uyg2Contact Map
4gd13r8sR 3r8tR 4gd1I 4gd2IContact Map
3ohc3ohcI 3ohdI 3ohjV 3ohkVContact Map
3knh3knhI 3kniV 3knjI 3knkVContact Map
3f1e3f1eI 3f1fV 3f1gI 3f1hVContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
15_E 13_A 0.86 0.00
78_K 122_A 0.85 0.00
95_L 13_A 0.84 0.00
78_K 20_R 0.82 0.00
38_L 51_R 0.76 0.00
76_K 88_Y 0.72 0.00
96_I 32_D 0.70 0.00
77_A 122_A 0.68 0.00
83_R 12_E 0.67 0.00
60_E 23_N 0.67 0.00
91_Y 80_G 0.66 0.00
75_F 117_H 0.66 0.00
44_K 95_K 0.62 0.00
58_V 27_T 0.60 0.00
67_G 106_A 0.60 0.00
17_G 94_A 0.59 0.00
60_E 41_V 0.59 0.00
26_D 32_D 0.59 0.00
44_K 23_N 0.59 0.00
26_D 56_L 0.58 0.00
9_G 74_I 0.58 0.00
47_V 125_Y 0.58 0.00
70_I 45_A 0.58 0.00
72_V 91_D 0.58 0.00
20_L 62_Y 0.57 0.00
73_S 123_P 0.57 0.00
18_L 82_A 0.57 0.00
30_G 75_D 0.57 0.00
75_F 97_K 0.56 0.00
33_V 66_R 0.56 0.00
75_F 116_K 0.56 0.00
76_K 37_F 0.56 0.00
17_G 56_L 0.56 0.00
4_I 38_Q 0.56 0.00
34_E 57_G 0.56 0.00
40_L 77_I 0.55 0.00
96_I 35_E 0.55 0.00
81_Y 37_F 0.55 0.00
85_K 19_L 0.55 0.00
23_E 80_G 0.54 0.00
63_G 102_L 0.54 0.00
46_V 83_R 0.54 0.00
4_I 88_Y 0.54 0.00
97_K 46_A 0.54 0.00
85_K 46_A 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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