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OPENSEQ.org
L21 - S02
UniProt: P60492 - P80371
Length: 357
Sequences: 1165
Seq/Len: 3.54
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cB 3v2dV 3v2eB 3v2fVContact Map
2j002j00B 2j01V 2j02B 2j03VContact Map
4juw4juwB 4juxVContact Map
4kix4kixR 4kiyB 4kizR 4kj0B 4kj1R 4kj2B 4kj3R 4kj4BContact Map
4kj54kj5R 4kj6B 4kj7R 4kj8B 4kj9R 4kjaB 4kjbR 4kjcBContact Map
3uyd3uydE 3uye2 3uyfE 3uyg2Contact Map
4gd13r8sR 3r8tR 4gd1B 4gd2BContact Map
3knh3knhB 3kniV 3knjB 3knkVContact Map
3ohc3ohcB 3ohdB 3ohjV 3ohkVContact Map
3ohy3ohyB 3ohzV 3oi0B 3oi1VContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_K 34_A 1.01 0.01
75_F 34_A 0.97 0.01
96_I 178_R 0.95 0.01
73_S 76_Q 0.86 0.01
78_K 111_R 0.86 0.01
27_A 89_G 0.84 0.01
70_I 62_A 0.82 0.01
17_G 212_Q 0.82 0.01
75_F 111_R 0.82 0.01
83_R 106_K 0.82 0.01
79_V 95_Q 0.79 0.01
30_G 11_L 0.79 0.01
31_A 155_L 0.76 0.01
84_K 108_I 0.73 0.01
48_G 153_R 0.73 0.01
21_R 186_A 0.71 0.01
79_V 109_S 0.71 0.01
33_V 184_V 0.71 0.01
99_I 15_V 0.70 0.01
99_I 195_D 0.70 0.01
95_L 68_I 0.69 0.01
21_R 203_G 0.69 0.01
83_R 144_R 0.69 0.01
44_K 6_T 0.68 0.01
16_P 165_V 0.68 0.01
58_V 158_L 0.67 0.01
59_A 50_E 0.67 0.01
2_F 22_K 0.66 0.01
40_L 60_D 0.66 0.01
78_K 216_S 0.65 0.01
31_A 120_A 0.64 0.01
20_L 181_F 0.64 0.01
91_Y 167_P 0.64 0.01
15_E 222_I 0.64 0.01
62_L 35_E 0.63 0.01
39_L 68_I 0.63 0.01
66_R 168_T 0.63 0.01
2_F 109_S 0.63 0.01
13_R 76_Q 0.63 0.01
55_A 31_Y 0.63 0.01
41_G 179_K 0.63 0.01
94_L 71_V 0.62 0.01
81_Y 76_Q 0.62 0.01
91_Y 213_L 0.62 0.00
89_Q 174_V 0.62 0.00
82_R 140_H 0.62 0.00
77_A 111_R 0.62 0.00
82_R 101_M 0.62 0.00
80_Q 214_I 0.61 0.00
44_K 108_I 0.60 0.00
36_P 174_V 0.60 0.00
45_T 183_P 0.60 0.00
58_V 184_V 0.60 0.00
41_G 88_A 0.60 0.00
38_L 138_L 0.59 0.00
44_K 117_E 0.59 0.00
72_V 117_E 0.59 0.00
54_G 164_V 0.59 0.00
39_L 192_S 0.59 0.00
37_V 118_L 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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