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OPENSEQ.org
L20 - L35
UniProt: P60491 - Q5SKU1
Length: 183
Sequences: 1049
Seq/Len: 5.80
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dU8 3v2fU8Contact Map
2j002j01U8 2j03U8Contact Map
4juw4juxU8Contact Map
4kix4kixQ3 4kizQ3 4kj1Q3 4kj3Q3Contact Map
4kj54kj5Q3 4kj7Q3 4kj9Q3 4kjbQ3Contact Map
2zjr2zjrN3Contact Map
4btc4btdU8Contact Map
3uyd3uye18 3uyg18Contact Map
3v223v23U8 3v25U8Contact Map
4gd13r8sQ3 3r8tQ3Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
47_Y 14_V 0.77 0.00
68_A 46_R 0.75 0.00
78_T 37_S 0.74 0.00
93_K 47_K 0.72 0.00
105_V 14_V 0.71 0.00
111_E 52_K 0.69 0.00
27_L 7_H 0.68 0.00
29_S 4_M 0.67 0.00
2_P 59_K 0.66 0.00
101_R 59_K 0.66 0.00
91_D 46_R 0.66 0.00
39_L 41_I 0.66 0.00
27_L 8_K 0.64 0.00
28_R 34_W 0.64 0.00
75_N 11_K 0.62 0.00
21_A 26_K 0.62 0.00
14_H 40_E 0.61 0.00
89_E 30_R 0.60 0.00
53_R 40_E 0.60 0.00
112_R 56_E 0.60 0.00
42_A 63_P 0.58 0.00
44_N 58_I 0.57 0.00
91_D 48_F 0.57 0.00
42_A 10_A 0.57 0.00
51_K 40_E 0.56 0.00
39_L 45_G 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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