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OPENSEQ.org
L20 - S16
UniProt: P60491 - Q5SJH3
Length: 206
Sequences: 1247
Seq/Len: 6.17
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cP 3v2dU 3v2eP 3v2fUContact Map
2j002j00P 2j01U 2j02P 2j03UContact Map
4juw4juwP 4juxUContact Map
4kix4kixQ 4kiyP 4kizQ 4kj0P 4kj1Q 4kj2P 4kj3Q 4kj4PContact Map
4kj54kj5Q 4kj6P 4kj7Q 4kj8P 4kj9Q 4kjaP 4kjbQ 4kjcPContact Map
3uyd3uydS 3uye1 3uyfS 3uyg1Contact Map
4gd13r8sQ 3r8tQ 4gd1P 4gd2PContact Map
3knh3knhP 3kniU 3knjP 3knkUContact Map
3ohc3ohcP 3ohdP 3ohjU 3ohkUContact Map
3f1e3f1eP 3f1fU 3f1gP 3f1hUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
10_R 70_A 0.80 0.00
14_H 72_R 0.71 0.00
30_K 14_N 0.69 0.00
4_A 40_D 0.69 0.00
14_H 69_T 0.68 0.00
2_P 69_T 0.67 0.00
65_I 12_K 0.66 0.00
2_P 2_V 0.65 0.00
45_Y 55_R 0.65 0.00
94_N 7_A 0.64 0.00
44_N 14_N 0.63 0.00
57_F 4_I 0.62 0.00
37_E 48_W 0.62 0.00
36_R 81_R 0.60 0.00
25_W 1_M 0.60 0.00
22_K 3_K 0.59 0.00
44_N 7_A 0.59 0.00
93_K 69_T 0.58 0.00
4_A 81_R 0.58 0.00
72_H 13_H 0.57 0.00
20_L 52_D 0.56 0.00
116_A 17_Y 0.56 0.00
13_K 20_V 0.56 0.00
13_K 39_Y 0.56 0.00
109_L 8_R 0.55 0.00
114_K 49_L 0.55 0.00
31_S 32_Y 0.55 0.00
75_N 74_L 0.54 0.00
36_R 65_Q 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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