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OPENSEQ.org
L20 - L36
UniProt: P60491 - Q5SHR2
Length: 155
Sequences: 840
Seq/Len: 5.46
I_Prob: 0.39
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dU9 3v2fU9Contact Map
2j002j01U9 2j03U9Contact Map
4juw4juxU9Contact Map
4kix4kixQ4 4kizQ4 4kj1Q4 4kj3Q4Contact Map
4kj54kj5Q4 4kj7Q4 4kj9Q4 4kjbQ4Contact Map
2zjr2zjrN4Contact Map
4btc4btdU9Contact Map
3v223v23U9 3v25U9Contact Map
4gd13r8sQ4 3r8tQ4Contact Map
3knh3kniU9 3knkU9Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
42_A 5_A 1.25 0.39
6_T 9_R 1.07 0.25
109_L 33_K 1.04 0.23
19_K 31_K 1.01 0.20
27_L 31_K 0.89 0.14
43_G 13_K 0.88 0.13
16_K 5_A 0.85 0.12
75_N 30_P 0.82 0.10
41_A 31_K 0.81 0.10
91_D 31_K 0.80 0.10
32_F 35_R 0.77 0.09
107_A 31_K 0.72 0.07
31_S 29_N 0.71 0.07
8_V 15_K 0.71 0.07
20_L 31_K 0.70 0.06
91_D 29_N 0.70 0.06
17_I 13_K 0.69 0.06
48_A 22_R 0.68 0.06
4_A 37_G 0.67 0.05
41_A 20_H 0.66 0.05
39_L 8_K 0.66 0.05
87_G 29_N 0.66 0.05
12_R 18_R 0.66 0.05
7_G 27_C 0.65 0.05
22_K 20_H 0.64 0.05
102_E 24_Y 0.64 0.05
108_E 28_E 0.63 0.05
74_L 35_R 0.63 0.05
51_K 3_V 0.63 0.05
5_K 11_C 0.63 0.04
51_K 18_R 0.63 0.04
5_K 37_G 0.63 0.04
13_K 35_R 0.62 0.04
14_H 10_I 0.61 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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