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OPENSEQ.org
L20 - S14
UniProt: P60491 - Q5SHQ1
Length: 179
Sequences: 1136
Seq/Len: 6.38
I_Prob: 0.09
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cN 3v2dU 3v2eN 3v2fUContact Map
2j002j00N 2j01U 2j02N 2j03UContact Map
4juw4juwN 4juxUContact Map
3uyd3uydQ 3uye1 3uyfQ 3uyg1Contact Map
3knh3knhN 3kniU 3knjN 3knkUContact Map
3ohc3ohcN 3ohdN 3ohjU 3ohkUContact Map
3ohy3ohyN 3ohzU 3oi0N 3oi1UContact Map
3f1e3f1eN 3f1fU 3f1gN 3f1hUContact Map
3v223v22N 3v23U 3v24N 3v25UContact Map
3uz63uz6Q 3uz7Q 3uz81 3uz91Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
40_F 49_H 1.08 0.09
114_K 50_K 0.86 0.04
14_H 49_H 0.80 0.03
6_T 53_L 0.76 0.03
23_G 41_R 0.70 0.02
98_L 18_V 0.69 0.02
27_L 32_S 0.68 0.02
11_R 37_F 0.68 0.02
48_A 35_R 0.67 0.02
49_H 35_R 0.66 0.02
63_V 59_A 0.65 0.02
49_H 10_A 0.65 0.02
51_K 51_G 0.63 0.02
12_R 59_A 0.63 0.02
98_L 33_V 0.63 0.02
23_G 58_K 0.63 0.02
18_L 56_V 0.62 0.02
32_F 35_R 0.61 0.02
100_V 59_A 0.60 0.02
42_A 8_E 0.59 0.01
115_A 6_L 0.58 0.01
36_R 59_A 0.58 0.01
75_N 46_E 0.58 0.01
42_A 24_C 0.56 0.01
42_A 49_H 0.56 0.01
14_H 26_R 0.56 0.01
31_S 59_A 0.56 0.01
94_N 34_Y 0.56 0.01
112_R 11_K 0.56 0.01
104_Q 57_R 0.55 0.01
13_K 32_S 0.55 0.01
113_A 53_L 0.55 0.01
38_T 49_H 0.55 0.01
109_L 47_L 0.55 0.01
7_G 5_A 0.55 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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