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OPENSEQ.org
L20 - L24
UniProt: P60491 - Q5SHP9
Length: 228
Sequences: 1296
Seq/Len: 5.92
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dUY 3v2fUYContact Map
2j002j01UY 2j03UYContact Map
4juw4juxUYContact Map
4kix4kixQU 4kizQU 4kj1QU 4kj3QUContact Map
4kj54kj5QU 4kj7QU 4kj9QU 4kjbQUContact Map
2zjr2zjrNRContact Map
4btc4btdUYContact Map
3uyd3uye1U 3uyg1UContact Map
4gd13r8sQU 3r8tQUContact Map
3ohc3ohjUY 3ohkUYContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
14_H 53_P 0.64 0.00
91_D 101_K 0.61 0.00
6_T 56_P 0.59 0.00
40_F 50_R 0.58 0.00
102_E 84_R 0.58 0.00
17_I 24_V 0.58 0.00
104_Q 75_I 0.57 0.00
13_K 23_R 0.56 0.00
47_Y 7_V 0.55 0.00
90_V 9_K 0.55 0.00
14_H 65_A 0.55 0.00
98_L 48_A 0.54 0.00
77_S 51_V 0.54 0.00
40_F 30_V 0.53 0.00
114_K 94_K 0.52 0.00
100_V 67_L 0.52 0.00
110_V 61_I 0.51 0.00
91_D 14_L 0.51 0.00
22_K 26_K 0.51 0.00
52_R 66_P 0.51 0.00
96_A 49_V 0.51 0.00
74_L 33_K 0.50 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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