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OPENSEQ.org
L20 - S13
UniProt: P60491 - P80377
Length: 244
Sequences: 1130
Seq/Len: 4.71
I_Prob: 0.17
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cM 3v2dU 3v2eM 3v2fUContact Map
2j002j00M 2j01U 2j02M 2j03UContact Map
4juw4juwM 4juxUContact Map
4kix4kixQ 4kiyM 4kizQ 4kj0M 4kj1Q 4kj2M 4kj3Q 4kj4MContact Map
4kj54kj5Q 4kj6M 4kj7Q 4kj8M 4kj9Q 4kjaM 4kjbQ 4kjcMContact Map
3uyd3uydP 3uye1 3uyfP 3uyg1Contact Map
4gd13r8sQ 3r8tQ 4gd1M 4gd2MContact Map
3knh3knhM 3kniU 3knjM 3knkUContact Map
3ohc3ohcM 3ohdM 3ohjU 3ohkUContact Map
3ohy3ohyM 3ohzU 3oi0M 3oi1UContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
91_D 84_I 1.17 0.17
10_R 72_A 0.95 0.09
84_K 20_T 0.85 0.06
100_V 113_P 0.82 0.06
6_T 119_G 0.78 0.05
40_F 104_R 0.76 0.04
40_F 18_A 0.74 0.04
14_H 8_E 0.73 0.04
93_K 33_A 0.73 0.04
98_L 118_A 0.73 0.04
82_G 111_K 0.73 0.04
38_T 44_R 0.73 0.04
88_I 12_N 0.71 0.04
37_E 82_M 0.71 0.04
94_N 30_A 0.70 0.04
108_E 40_N 0.70 0.03
56_D 12_N 0.68 0.03
96_A 102_R 0.68 0.03
16_K 83_D 0.68 0.03
73_G 40_N 0.66 0.03
47_Y 105_T 0.66 0.03
98_L 52_E 0.66 0.03
93_K 25_I 0.66 0.03
69_C 95_G 0.66 0.03
79_F 115_K 0.66 0.03
108_E 51_A 0.65 0.03
53_R 64_W 0.65 0.03
7_G 61_E 0.64 0.03
14_H 30_A 0.62 0.02
37_E 72_A 0.61 0.02
109_L 113_P 0.61 0.02
33_R 117_V 0.61 0.02
31_S 54_V 0.61 0.02
47_Y 53_V 0.61 0.02
40_F 90_L 0.61 0.02
6_T 72_A 0.60 0.02
14_H 52_E 0.60 0.02
112_R 53_V 0.60 0.02
97_D 22_I 0.59 0.02
4_A 69_E 0.59 0.02
89_E 51_A 0.58 0.02
22_K 18_A 0.58 0.02
6_T 117_V 0.58 0.02
40_F 56_L 0.58 0.02
4_A 36_K 0.58 0.02
28_R 75_A 0.58 0.02
6_T 116_T 0.58 0.02
41_A 27_K 0.57 0.02
90_V 94_R 0.57 0.02
2_P 2_A 0.57 0.02
59_R 11_R 0.57 0.02
33_R 85_G 0.57 0.02
35_A 22_I 0.57 0.02
93_K 104_R 0.57 0.02
32_F 27_K 0.56 0.02
87_G 113_P 0.56 0.02
116_A 35_E 0.56 0.02
81_H 56_L 0.56 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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