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OPENSEQ.org
L19 - S18
UniProt: P60490 - Q5SLQ0
Length: 234
Sequences: 996
Seq/Len: 5.41
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cR 3v2dT 3v2eR 3v2fTContact Map
2j002j00R 2j01T 2j02R 2j03TContact Map
4juw4juwR 4juxTContact Map
4kix4kixP 4kiyR 4kizP 4kj0R 4kj1P 4kj2R 4kj3P 4kj4RContact Map
4kj54kj5P 4kj6R 4kj7P 4kj8R 4kj9P 4kjaR 4kjbP 4kjcRContact Map
3uyd3uydU 3uyeR 3uyfU 3uygRContact Map
3knh3knhR 3kniT 3knjR 3knkTContact Map
3ohc3ohcR 3ohdR 3ohjT 3ohkTContact Map
3ohy3ohyR 3ohzT 3oi0R 3oi1TContact Map
3f1e3f1eR 3f1fT 3f1gR 3f1hTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
34_V 82_T 0.86 0.00
79_H 45_S 0.84 0.00
65_K 23_K 0.84 0.00
97_A 18_R 0.79 0.00
60_T 53_R 0.79 0.00
39_R 42_R 0.79 0.00
90_Q 43_F 0.78 0.00
88_I 72_R 0.76 0.00
58_N 66_L 0.76 0.00
35_K 44_L 0.76 0.00
112_R 78_L 0.74 0.00
82_L 70_I 0.74 0.00
42_I 72_R 0.74 0.00
98_K 18_R 0.73 0.00
86_I 38_E 0.73 0.00
15_V 60_A 0.72 0.00
59_T 82_T 0.72 0.00
109_E 53_R 0.71 0.00
51_R 65_I 0.71 0.00
55_N 65_I 0.70 0.00
34_V 30_D 0.68 0.00
45_F 75_I 0.68 0.00
102_I 49_K 0.67 0.00
81_P 43_F 0.67 0.00
59_T 42_R 0.67 0.00
83_I 68_K 0.66 0.00
76_F 79_L 0.65 0.00
65_K 18_R 0.65 0.00
75_I 47_T 0.65 0.00
60_T 47_T 0.65 0.00
61_F 24_A 0.64 0.00
42_I 82_T 0.64 0.00
65_K 17_S 0.63 0.00
28_V 17_S 0.63 0.00
57_F 66_L 0.63 0.00
59_T 53_R 0.62 0.00
111_R 23_K 0.62 0.00
113_K 57_G 0.62 0.00
28_V 19_K 0.61 0.00
35_K 32_R 0.61 0.00
2_N 46_E 0.61 0.00
111_R 19_K 0.60 0.00
26_D 78_L 0.60 0.00
34_V 65_I 0.60 0.00
113_K 56_T 0.60 0.00
34_V 83_E 0.60 0.00
9_L 21_K 0.59 0.00
102_I 83_E 0.59 0.00
75_I 23_K 0.59 0.00
30_V 64_R 0.59 0.00
89_V 41_K 0.59 0.00
40_T 59_S 0.57 0.00
32_Y 64_R 0.57 0.00
58_N 38_E 0.57 0.00
82_L 45_S 0.57 0.00
97_A 51_L 0.56 0.00
7_I 46_E 0.56 0.00
62_T 27_G 0.56 0.00
17_T 18_R 0.56 0.00
86_I 68_K 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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