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OPENSEQ.org
L19 - L31
UniProt: P60490 - Q5SJE1
Length: 217
Sequences: 1163
Seq/Len: 6.42
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dT4 3v2fT4Contact Map
2j002j01T4 2j03T4Contact Map
4juw4juxT4Contact Map
4btc4btdT4Contact Map
3uyd3uyeR4 3uygR4Contact Map
3v223v23T4 3v25T4Contact Map
3uz63uz8R4 3uz9R4Contact Map
3knh3kniT4 3knkT4Contact Map
3ohc3ohjT4 3ohkT4Contact Map
3ohy3ohzT4 3oi1T4Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
96_R 58_R 0.95 0.01
39_R 32_Y 0.93 0.01
12_S 56_V 0.88 0.01
18_D 57_E 0.70 0.01
13_R 17_G 0.69 0.01
85_K 48_R 0.69 0.01
65_K 48_R 0.67 0.01
39_R 21_V 0.66 0.01
45_F 47_Q 0.66 0.01
8_K 49_F 0.66 0.01
106_S 62_R 0.65 0.01
116_A 43_Y 0.65 0.01
35_K 19_G 0.65 0.01
104_N 14_I 0.64 0.01
49_V 3_E 0.64 0.01
34_V 52_T 0.64 0.01
71_G 61_R 0.64 0.01
115_R 65_D 0.63 0.01
88_I 28_K 0.61 0.01
74_R 58_R 0.60 0.01
20_P 5_I 0.60 0.01
80_S 56_V 0.58 0.01
79_H 46_Q 0.58 0.01
115_R 52_T 0.58 0.01
34_V 53_E 0.58 0.01
46_E 33_V 0.57 0.01
7_I 2_K 0.57 0.01
108_R 62_R 0.57 0.00
77_P 24_T 0.56 0.00
58_N 60_Q 0.56 0.00
39_R 53_E 0.56 0.00
60_T 24_T 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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