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OPENSEQ.org
L19 - L30
UniProt: P60490 - Q5SHQ6
Length: 206
Sequences: 915
Seq/Len: 5.23
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dT3 3v2fT3Contact Map
2j002j01T3 2j03T3Contact Map
4juw4juxT3Contact Map
4kix4kixPZ 4kizPZ 4kj1PZ 4kj3PZContact Map
4kj54kj5PZ 4kj7PZ 4kj9PZ 4kjbPZContact Map
2zjr2zjrMWContact Map
4btc4btdT3Contact Map
3uyd3uyeRX 3uygRXContact Map
4gd13r8sPZ 3r8tPZContact Map
3ohc3ohjT3 3ohkT3Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
88_I 58_V 0.81 0.00
13_R 8_L 0.74 0.00
65_K 37_L 0.74 0.00
34_V 59_V 0.72 0.00
6_L 9_V 0.71 0.00
68_Y 55_R 0.71 0.00
34_V 40_T 0.70 0.00
116_A 52_H 0.69 0.00
15_V 53_L 0.66 0.00
100_Y 23_L 0.65 0.00
46_E 8_L 0.64 0.00
78_L 48_E 0.63 0.00
87_D 6_V 0.62 0.00
40_T 32_Q 0.62 0.00
76_F 49_K 0.62 0.00
35_K 14_G 0.62 0.00
79_H 29_R 0.62 0.00
14_Y 8_L 0.62 0.00
67_S 9_V 0.60 0.00
77_P 19_Q 0.60 0.00
68_Y 7_K 0.60 0.00
77_P 52_H 0.59 0.00
40_T 42_A 0.59 0.00
7_I 47_V 0.58 0.00
65_K 15_Y 0.56 0.00
29_R 11_S 0.55 0.00
21_E 24_K 0.55 0.00
35_K 51_A 0.55 0.00
75_I 5_K 0.55 0.00
61_F 50_V 0.54 0.00
28_V 1_M 0.54 0.00
97_A 36_V 0.54 0.00
45_F 4_L 0.54 0.00
70_V 32_Q 0.54 0.00
33_K 59_V 0.53 0.00
65_K 8_L 0.53 0.00
23_R 36_V 0.53 0.00
50_I 16_P 0.53 0.00
84_Q 15_Y 0.53 0.00
81_P 50_V 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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