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OPENSEQ.org
L19 - S05
UniProt: P60490 - Q5SHQ5
Length: 308
Sequences: 1031
Seq/Len: 3.78
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cE 3v2dT 3v2eE 3v2fTContact Map
2j002j00E 2j01T 2j02E 2j03TContact Map
4juw4juwE 4juxTContact Map
4kix4kixP 4kiyE 4kizP 4kj0E 4kj1P 4kj2E 4kj3P 4kj4EContact Map
4kj54kj5P 4kj6E 4kj7P 4kj8E 4kj9P 4kjaE 4kjbP 4kjcEContact Map
3uyd3uydH 3uyeR 3uyfH 3uygRContact Map
4gd13r8sP 3r8tP 4gd1E 4gd2EContact Map
3knh3knhE 3kniT 3knjE 3knkTContact Map
3ohc3ohcE 3ohdE 3ohjT 3ohkTContact Map
3ohy3ohyE 3ohzT 3oi0E 3oi1TContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
10_V 80_I 0.99 0.01
104_N 133_Y 0.92 0.01
14_Y 132_A 0.91 0.01
15_V 48_A 0.86 0.01
28_V 117_D 0.85 0.01
51_R 150_R 0.84 0.01
61_F 98_T 0.83 0.01
111_R 119_L 0.82 0.01
65_K 155_E 0.82 0.01
45_F 131_I 0.79 0.01
45_F 146_A 0.78 0.01
74_R 70_P 0.78 0.01
70_V 16_T 0.77 0.01
52_I 122_E 0.76 0.01
54_R 117_D 0.76 0.01
96_R 78_H 0.76 0.01
88_I 147_D 0.75 0.01
114_L 132_A 0.75 0.01
9_L 137_E 0.75 0.01
106_S 159_Q 0.74 0.01
61_F 26_F 0.74 0.01
109_E 120_T 0.72 0.01
100_Y 43_L 0.71 0.01
101_F 18_R 0.70 0.01
98_K 151_L 0.70 0.01
83_I 117_D 0.69 0.01
10_V 156_A 0.69 0.01
11_E 82_V 0.68 0.01
65_K 56_Q 0.67 0.01
78_L 10_M 0.67 0.01
20_P 120_T 0.67 0.01
70_V 63_R 0.66 0.01
14_Y 55_V 0.66 0.01
39_R 27_R 0.65 0.01
11_E 5_D 0.65 0.01
56_G 128_P 0.65 0.01
34_V 69_V 0.65 0.01
33_K 69_V 0.65 0.01
57_F 9_K 0.64 0.01
46_E 149_E 0.64 0.01
81_P 82_V 0.64 0.01
40_T 40_R 0.64 0.01
104_N 140_R 0.64 0.01
65_K 116_T 0.63 0.01
32_Y 20_Q 0.63 0.00
97_A 122_E 0.63 0.00
17_T 4_T 0.62 0.00
104_N 105_V 0.62 0.00
29_R 56_Q 0.62 0.00
80_S 105_V 0.62 0.00
65_K 105_V 0.62 0.00
52_I 82_V 0.62 0.00
9_L 141_Q 0.62 0.00
75_I 59_G 0.61 0.00
82_L 131_I 0.61 0.00
40_T 125_S 0.61 0.00
40_T 19_M 0.61 0.00
75_I 52_P 0.61 0.00
34_V 30_A 0.61 0.00
48_I 83_E 0.60 0.00
34_V 104_A 0.60 0.00
28_V 137_E 0.60 0.00
99_L 25_R 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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