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OPENSEQ.org
L19 - L23
UniProt: P60490 - Q5SHP0
Length: 242
Sequences: 1202
Seq/Len: 5.75
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dTX 3v2fTXContact Map
2j002j01TX 2j03TXContact Map
4juw4juxTXContact Map
2zjr2zjrMQContact Map
4btc4btdTXContact Map
3uyd3uyeRT 3uygRTContact Map
3knh3kniTX 3knkTXContact Map
3ohc3ohjTX 3ohkTXContact Map
3ohy3ohzTX 3oi1TXContact Map
3f1e3f1fTX 3f1hTXContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
6_L 21_F 0.95 0.01
109_E 58_H 0.85 0.01
40_T 83_V 0.79 0.01
100_Y 50_K 0.79 0.01
56_G 71_G 0.79 0.01
39_R 25_K 0.78 0.01
60_T 20_G 0.77 0.01
10_V 13_L 0.77 0.01
52_I 14_S 0.76 0.01
24_P 87_Q 0.75 0.01
24_P 65_R 0.74 0.01
102_I 13_L 0.73 0.01
26_D 77_K 0.71 0.01
28_V 31_H 0.70 0.01
60_T 23_E 0.70 0.01
45_F 46_A 0.67 0.01
62_T 85_P 0.66 0.01
32_Y 8_I 0.66 0.01
17_T 52_V 0.65 0.01
39_R 55_N 0.65 0.01
86_I 64_K 0.65 0.01
80_S 74_P 0.65 0.01
109_E 25_K 0.65 0.01
44_D 60_R 0.64 0.01
32_Y 46_A 0.64 0.01
13_R 90_E 0.64 0.01
114_L 62_K 0.64 0.01
109_E 47_F 0.62 0.01
100_Y 95_L 0.62 0.01
75_I 21_F 0.62 0.01
52_I 6_D 0.61 0.01
114_L 46_A 0.61 0.01
59_T 73_R 0.60 0.01
28_V 86_G 0.60 0.01
105_L 83_V 0.59 0.01
106_S 9_L 0.59 0.01
48_I 59_V 0.58 0.00
61_F 94_G 0.58 0.00
81_P 80_I 0.58 0.00
72_V 85_P 0.58 0.00
18_D 32_P 0.58 0.00
87_D 39_I 0.58 0.00
80_S 46_A 0.57 0.00
35_K 8_I 0.57 0.00
45_F 41_N 0.56 0.00
22_F 59_V 0.56 0.00
78_L 59_V 0.56 0.00
72_V 83_V 0.55 0.00
13_R 13_L 0.55 0.00
87_D 19_A 0.55 0.00
49_V 58_H 0.55 0.00
65_K 26_Y 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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