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OPENSEQ.org
L19 - L28
UniProt: P60490 - P60494
Length: 244
Sequences: 961
Seq/Len: 5.34
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dT1 3v2fT1Contact Map
2j002j01T1 2j03T1Contact Map
4juw4juxT1Contact Map
4kix4kixPX 4kizPX 4kj1PX 4kj3PXContact Map
4kj54kj5PX 4kj7PX 4kj9PX 4kjbPXContact Map
2zjr2zjrMUContact Map
4btc4btdT1Contact Map
3uyd3uyeRZ 3uygRZContact Map
3v223v23T1 3v25T1Contact Map
4gd13r8sPX 3r8tPXContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
15_V 14_V 0.85 0.00
53_R 50_R 0.84 0.00
90_Q 67_I 0.78 0.00
39_R 74_V 0.77 0.00
24_P 34_T 0.76 0.00
111_R 47_Q 0.75 0.00
84_Q 36_G 0.74 0.00
98_K 14_V 0.73 0.00
46_E 67_I 0.72 0.00
32_Y 47_Q 0.69 0.00
6_L 46_L 0.69 0.00
84_Q 46_L 0.69 0.00
15_V 50_R 0.69 0.00
69_G 44_P 0.69 0.00
27_T 9_G 0.68 0.00
65_K 36_G 0.68 0.00
65_K 16_N 0.66 0.00
40_T 10_K 0.65 0.00
82_L 18_I 0.65 0.00
111_R 39_K 0.65 0.00
61_F 46_L 0.64 0.00
18_D 68_P 0.64 0.00
54_R 43_Y 0.64 0.00
42_I 69_K 0.63 0.00
104_N 13_I 0.61 0.00
18_D 56_Q 0.61 0.00
6_L 12_P 0.61 0.00
23_R 38_S 0.61 0.00
13_R 62_V 0.60 0.00
96_R 37_I 0.60 0.00
58_N 56_Q 0.59 0.00
89_V 38_S 0.59 0.00
40_T 17_S 0.58 0.00
97_A 62_V 0.58 0.00
32_Y 20_R 0.58 0.00
78_L 62_V 0.58 0.00
115_R 42_Q 0.58 0.00
17_T 17_S 0.58 0.00
34_V 57_E 0.57 0.00
93_R 41_R 0.56 0.00
11_E 6_E 0.56 0.00
60_T 53_V 0.56 0.00
90_Q 74_V 0.56 0.00
83_I 48_K 0.56 0.00
96_R 35_T 0.55 0.00
75_I 48_K 0.55 0.00
59_T 66_H 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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