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OPENSEQ.org
L16 - L35
UniProt: P60489 - Q5SKU1
Length: 206
Sequences: 940
Seq/Len: 4.65
I_Prob: 0.16
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dQ8 3v2fQ8Contact Map
2j002j01Q8 2j03Q8Contact Map
4juw4juxQ8Contact Map
4kix4kixM3 4kizM3 4kj1M3 4kj3M3Contact Map
4kj54kj5M3 4kj7M3 4kj9M3 4kjbM3Contact Map
2zjr2zjrJ3Contact Map
4btc4btdQ8Contact Map
3uyd3uyeP8 3uygP8Contact Map
4gd13r8sM3 3r8tM3Contact Map
3ohc3ohjQ8 3ohkQ8Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
130_K 28_G 1.16 0.16
32_Y 38_G 0.87 0.07
85_K 34_W 0.84 0.06
45_Q 54_E 0.84 0.06
27_V 22_V 0.81 0.05
60_R 1_M 0.81 0.05
41_W 26_K 0.79 0.05
75_T 7_H 0.77 0.04
34_L 22_V 0.76 0.04
52_V 59_K 0.76 0.04
131_I 54_E 0.74 0.04
57_H 9_G 0.74 0.04
81_V 40_E 0.72 0.04
34_L 62_L 0.71 0.04
81_V 38_G 0.71 0.03
59_R 59_K 0.70 0.03
106_V 50_L 0.70 0.03
12_Q 25_M 0.70 0.03
25_D 14_V 0.69 0.03
135_D 61_L 0.69 0.03
110_T 19_S 0.69 0.03
127_I 26_K 0.68 0.03
3_M 34_W 0.68 0.03
11_K 9_G 0.68 0.03
59_R 12_K 0.67 0.03
37_L 55_A 0.67 0.03
14_R 14_V 0.67 0.03
110_T 52_K 0.66 0.03
134_R 2_P 0.65 0.03
27_V 44_K 0.65 0.03
64_I 57_R 0.63 0.02
13_Q 54_E 0.62 0.02
127_I 48_F 0.62 0.02
6_R 8_K 0.61 0.02
32_Y 9_G 0.61 0.02
93_Y 17_T 0.60 0.02
38_E 9_G 0.60 0.02
39_P 63_P 0.60 0.02
104_F 8_K 0.59 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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