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OPENSEQ.org
L16 - L31
UniProt: P60489 - Q5SJE1
Length: 212
Sequences: 1006
Seq/Len: 4.96
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dQ4 3v2fQ4Contact Map
2j002j01Q4 2j03Q4Contact Map
4juw4juxQ4Contact Map
4btc4btdQ4Contact Map
3uyd3uyeP4 3uygP4Contact Map
3knh3kniQ4 3knkQ4Contact Map
3ohc3ohjQ4 3ohkQ4Contact Map
3f1e3f1fQ4 3f1hQ4Contact Map
3ohy3ohzQ4 3oi1Q4Contact Map
3v223v23Q4 3v25Q4Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
35_V 56_V 0.77 0.00
96_V 4_G 0.74 0.00
50_A 3_E 0.74 0.00
14_R 33_V 0.73 0.00
67_R 53_E 0.72 0.00
9_Y 19_G 0.71 0.00
106_V 17_G 0.69 0.00
52_V 34_E 0.69 0.00
79_L 57_E 0.69 0.00
65_F 49_F 0.68 0.00
104_F 22_I 0.68 0.00
130_K 32_Y 0.67 0.00
25_D 23_E 0.67 0.00
56_R 63_Y 0.66 0.00
101_R 48_R 0.65 0.00
85_K 34_E 0.65 0.00
54_M 56_V 0.65 0.00
134_R 24_T 0.63 0.00
12_Q 63_Y 0.63 0.00
118_L 46_Q 0.62 0.00
75_T 62_R 0.62 0.00
64_I 35_V 0.61 0.00
29_F 43_Y 0.61 0.00
113_Q 21_V 0.61 0.00
27_V 37_S 0.61 0.00
41_W 57_E 0.61 0.00
63_K 57_E 0.60 0.00
20_A 35_V 0.60 0.00
31_D 62_R 0.59 0.00
137_Y 10_V 0.59 0.00
89_N 56_V 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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