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OPENSEQ.org
L16 - L36
UniProt: P60489 - Q5SHR2
Length: 178
Sequences: 707
Seq/Len: 4.04
I_Prob: 0.07
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dQ9 3v2fQ9Contact Map
2j002j01Q9 2j03Q9Contact Map
4juw4juxQ9Contact Map
4kix4kixM4 4kizM4 4kj1M4 4kj3M4Contact Map
4kj54kj5M4 4kj7M4 4kj9M4 4kjbM4Contact Map
2zjr2zjrJ4Contact Map
4btc4btdQ9Contact Map
4gd13r8sM4 3r8tM4Contact Map
3knh3kniQ9 3knkQ9Contact Map
3v223v23Q9 3v25Q9Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
41_W 31_K 1.11 0.07
67_R 5_A 1.01 0.05
91_E 30_P 0.96 0.05
133_R 35_R 0.96 0.05
53_A 22_R 0.87 0.03
137_Y 23_V 0.86 0.03
63_K 31_K 0.86 0.03
61_G 31_K 0.85 0.03
44_A 5_A 0.84 0.03
120_I 31_K 0.84 0.03
35_V 9_R 0.82 0.03
75_T 10_I 0.79 0.03
11_K 24_Y 0.77 0.02
5_R 4_R 0.77 0.02
15_G 4_R 0.77 0.02
5_R 18_R 0.75 0.02
78_P 18_R 0.74 0.02
63_K 23_V 0.74 0.02
89_N 12_D 0.74 0.02
138_D 18_R 0.73 0.02
20_A 20_H 0.73 0.02
50_A 5_A 0.73 0.02
97_V 25_V 0.72 0.02
57_H 31_K 0.72 0.02
115_M 9_R 0.68 0.02
98_K 22_R 0.68 0.02
94_V 17_I 0.68 0.02
67_R 31_K 0.67 0.02
92_G 31_K 0.66 0.01
95_A 3_V 0.65 0.01
14_R 17_I 0.65 0.01
136_A 13_K 0.65 0.01
31_D 35_R 0.65 0.01
9_Y 15_K 0.65 0.01
39_P 22_R 0.64 0.01
92_G 17_I 0.64 0.01
7_M 12_D 0.64 0.01
111_E 23_V 0.64 0.01
78_P 13_K 0.64 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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