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OPENSEQ.org
L16 - S12
UniProt: P60489 - Q5SHN3
Length: 273
Sequences: 915
Seq/Len: 3.48
I_Prob: 0.19
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cL 3v2dQ 3v2eL 3v2fQContact Map
2j002j00L 2j01Q 2j02L 2j03QContact Map
4juw4juwL 4juxQContact Map
4kix4kixM 4kiyL 4kizM 4kj0L 4kj1M 4kj2L 4kj3M 4kj4LContact Map
4kj54kj5M 4kj6L 4kj7M 4kj8L 4kj9M 4kjaL 4kjbM 4kjcLContact Map
3knh3knhL 3kniQ 3knjL 3knkQContact Map
3ohc3ohcL 3ohdL 3ohjQ 3ohkQContact Map
3uz63uz6O 3uz7O 3uz8P 3uz9PContact Map
3oge3ogeL 3ogyL 3oh5Q 3oh7QContact Map
3uyd3uydO 3uyeP 3uyfO 3uygPContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
45_Q 36_V 1.22 0.19
49_A 56_R 1.21 0.18
39_P 68_P 1.06 0.12
137_Y 20_K 1.05 0.11
8_K 18_K 1.04 0.11
45_Q 35_T 1.02 0.10
133_R 119_T 1.02 0.10
127_I 13_E 0.97 0.09
44_A 61_Y 0.97 0.09
17_L 68_P 0.96 0.09
130_K 58_T 0.96 0.09
78_P 41_T 0.96 0.08
29_F 36_V 0.95 0.08
45_Q 38_R 0.95 0.08
131_I 14_K 0.92 0.07
79_L 2_P 0.92 0.07
131_I 65_A 0.92 0.07
133_R 13_E 0.90 0.07
24_G 106_G 0.85 0.06
23_G 124_E 0.82 0.05
71_D 52_V 0.81 0.05
7_M 59_S 0.80 0.05
40_A 104_A 0.79 0.04
112_E 14_K 0.79 0.04
77_K 5_N 0.79 0.04
14_R 113_S 0.78 0.04
14_R 70_E 0.78 0.04
136_A 68_P 0.77 0.04
34_L 96_H 0.77 0.04
104_F 33_V 0.77 0.04
138_D 58_T 0.77 0.04
52_V 108_K 0.77 0.04
17_L 116_K 0.76 0.04
28_A 104_A 0.76 0.04
100_G 74_L 0.75 0.04
110_T 109_D 0.75 0.04
78_P 34_C 0.74 0.04
118_L 65_A 0.74 0.04
134_R 98_V 0.74 0.04
94_V 94_R 0.74 0.04
31_D 14_K 0.73 0.04
50_A 30_R 0.73 0.04
32_Y 96_H 0.73 0.04
72_K 105_A 0.73 0.04
38_E 121_K 0.72 0.04
133_R 109_D 0.71 0.03
115_M 98_V 0.71 0.03
104_F 105_A 0.71 0.03
123_H 5_N 0.71 0.03
61_G 80_V 0.71 0.03
81_V 21_V 0.70 0.03
112_E 119_T 0.70 0.03
110_T 17_K 0.69 0.03
136_A 30_R 0.69 0.03
41_W 21_V 0.69 0.03
63_K 111_K 0.69 0.03
110_T 113_S 0.69 0.03
96_V 68_P 0.69 0.03
132_V 49_L 0.69 0.03
133_R 17_K 0.68 0.03
71_D 38_R 0.68 0.03
50_A 9_R 0.68 0.03
52_V 59_S 0.68 0.03
90_V 93_V 0.68 0.03
133_R 101_V 0.68 0.03
44_A 4_I 0.67 0.03
18_K 13_E 0.67 0.03
64_I 16_R 0.67 0.03
22_K 108_K 0.67 0.03
54_M 109_D 0.67 0.03
3_M 19_S 0.67 0.03
130_K 63_V 0.66 0.03
32_Y 70_E 0.66 0.03
1_M 36_V 0.66 0.03
40_A 111_K 0.66 0.03
122_G 109_D 0.66 0.03
83_M 15_V 0.66 0.03
135_D 121_K 0.66 0.03
106_V 58_T 0.66 0.03
85_K 116_K 0.66 0.03
111_E 109_D 0.66 0.03
5_R 125_A 0.66 0.03
50_A 120_K 0.65 0.03
17_L 82_I 0.65 0.03
29_F 73_N 0.65 0.03
93_Y 54_K 0.65 0.03
102_V 26_G 0.65 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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