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OPENSEQ.org
L16 - S20
UniProt: P60489 - P80380
Length: 247
Sequences: 1086
Seq/Len: 4.85
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cT 3v2dQ 3v2eT 3v2fQContact Map
2j002j00T 2j01Q 2j02T 2j03QContact Map
4juw4juwT 4juxQContact Map
4kix4kixM 4kiyT 4kizM 4kj0T 4kj1M 4kj2T 4kj3M 4kj4TContact Map
4kj54kj5M 4kj6T 4kj7M 4kj8T 4kj9M 4kjaT 4kjbM 4kjcTContact Map
3knh3knhT 3kniQ 3knjT 3knkQContact Map
3ohc3ohcT 3ohdT 3ohjQ 3ohkQContact Map
3uz63uz6W 3uz7W 3uz8P 3uz9PContact Map
3oge3ogeT 3ogyT 3oh5Q 3oh7QContact Map
3uyd3uydW 3uyeP 3uyfW 3uygPContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
39_P 76_A 0.91 0.01
118_L 38_K 0.90 0.01
81_V 34_K 0.88 0.01
49_A 41_I 0.85 0.01
67_R 83_R 0.81 0.01
11_K 61_S 0.81 0.01
85_K 8_R 0.77 0.00
12_Q 63_I 0.77 0.00
38_E 22_R 0.76 0.00
52_V 89_R 0.76 0.00
95_A 90_Q 0.74 0.00
101_R 19_S 0.72 0.00
49_A 46_E 0.72 0.00
61_G 66_A 0.72 0.00
103_M 13_L 0.70 0.00
131_I 11_S 0.70 0.00
68_I 69_G 0.68 0.00
81_V 29_K 0.68 0.00
90_V 72_L 0.68 0.00
49_A 83_R 0.67 0.00
78_P 8_R 0.67 0.00
120_I 63_I 0.66 0.00
104_F 66_A 0.65 0.00
89_N 80_R 0.65 0.00
115_M 91_L 0.65 0.00
80_E 73_H 0.65 0.00
45_Q 34_K 0.64 0.00
122_G 88_V 0.64 0.00
101_R 59_A 0.64 0.00
27_V 53_L 0.64 0.00
89_N 92_L 0.63 0.00
102_V 57_R 0.63 0.00
41_W 89_R 0.62 0.00
121_A 33_I 0.62 0.00
71_D 27_K 0.61 0.00
39_P 80_R 0.61 0.00
75_T 91_L 0.61 0.00
58_F 33_I 0.60 0.00
127_I 72_L 0.60 0.00
36_A 51_E 0.60 0.00
21_T 17_R 0.60 0.00
92_G 35_T 0.59 0.00
24_G 73_H 0.59 0.00
83_M 33_I 0.59 0.00
45_Q 19_S 0.58 0.00
78_P 52_A 0.58 0.00
8_K 84_L 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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