May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
L16 - L32
UniProt: P60489 - P80339
Length: 201
Sequences: 755
Seq/Len: 3.87
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dQ5 3v2fQ5Contact Map
2j002j01Q5 2j03Q5Contact Map
4juw4juxQ5Contact Map
4kix4kixM0 4kizM0 4kj1M0 4kj3M0Contact Map
4kj54kj5M0 4kj7M0 4kj9M0 4kjbM0Contact Map
2zjr2zjrJZContact Map
4btc4btdQ5Contact Map
3uyd3uyeP5 3uygP5Contact Map
4gd13r8sM0 3r8tM0Contact Map
3ohc3ohjQ5 3ohkQ5Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
134_R 34_P 0.91 0.00
27_V 56_K 0.88 0.00
64_I 28_P 0.87 0.00
3_M 6_V 0.87 0.00
44_A 16_R 0.85 0.00
65_F 5_P 0.85 0.00
12_Q 12_S 0.84 0.00
25_D 45_V 0.83 0.00
81_V 22_H 0.79 0.00
61_G 47_P 0.78 0.00
28_A 34_P 0.77 0.00
63_K 30_L 0.75 0.00
79_L 42_P 0.75 0.00
44_A 17_D 0.75 0.00
31_D 46_C 0.75 0.00
78_P 21_S 0.73 0.00
75_T 33_C 0.72 0.00
19_G 5_P 0.71 0.00
63_K 26_T 0.70 0.00
101_R 27_P 0.69 0.00
132_V 59_E 0.69 0.00
55_V 8_K 0.68 0.00
12_Q 8_K 0.68 0.00
61_G 46_C 0.67 0.00
138_D 10_K 0.67 0.00
42_I 48_E 0.67 0.00
132_V 26_T 0.66 0.00
89_N 12_S 0.66 0.00
60_R 20_R 0.66 0.00
29_F 22_H 0.66 0.00
134_R 41_P 0.65 0.00
127_I 51_Y 0.65 0.00
89_N 32_P 0.64 0.00
101_R 28_P 0.63 0.00
73_P 31_V 0.63 0.00
108_G 34_P 0.63 0.00
85_K 55_R 0.63 0.00
130_K 7_P 0.63 0.00
133_R 57_V 0.62 0.00
41_W 44_T 0.62 0.00
25_D 14_A 0.62 0.00
76_K 41_P 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 3.7204 seconds.