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OPENSEQ.org
L16 - L20
UniProt: P60489 - P60491
Length: 259
Sequences: 1099
Seq/Len: 4.31
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dQU 3v2fQUContact Map
2j002j01QU 2j03QUContact Map
4juw4juxQUContact Map
4kix4kixMQ 4kizMQ 4kj1MQ 4kj3MQContact Map
4kj54kj5MQ 4kj7MQ 4kj9MQ 4kjbMQContact Map
2zjr2zjrJNContact Map
4btc4btdQUContact Map
3uyd3uyeP1 3uygP1Contact Map
4gd13r8sMQ 3r8tMQContact Map
3knh3kniQU 3knkQUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
14_R 40_F 0.99 0.02
33_G 109_L 0.98 0.02
90_V 14_H 0.98 0.02
90_V 63_V 0.93 0.01
52_V 37_E 0.92 0.01
130_K 53_R 0.84 0.01
43_T 97_D 0.80 0.01
52_V 6_T 0.78 0.01
16_R 80_I 0.77 0.01
63_K 20_L 0.77 0.01
57_H 94_N 0.77 0.01
45_Q 49_H 0.75 0.01
59_R 53_R 0.74 0.01
131_I 2_P 0.74 0.01
67_R 42_A 0.73 0.01
49_A 80_I 0.73 0.01
106_V 84_K 0.73 0.01
68_I 101_R 0.72 0.01
107_A 56_D 0.72 0.01
38_E 111_E 0.70 0.01
131_I 1_M 0.70 0.01
82_R 26_G 0.69 0.01
106_V 10_R 0.68 0.01
112_E 69_C 0.68 0.01
3_M 28_R 0.68 0.01
39_P 43_G 0.67 0.01
25_D 47_Y 0.65 0.01
118_L 34_K 0.65 0.01
8_K 23_G 0.65 0.01
75_T 30_K 0.65 0.01
100_G 47_Y 0.65 0.01
35_V 40_F 0.65 0.01
27_V 40_F 0.65 0.01
111_E 91_D 0.65 0.01
96_V 42_A 0.64 0.01
13_Q 17_I 0.64 0.01
104_F 8_V 0.64 0.01
80_E 15_K 0.64 0.01
76_K 97_D 0.64 0.01
85_K 2_P 0.64 0.01
79_L 25_W 0.63 0.01
6_R 70_R 0.62 0.01
29_F 49_H 0.62 0.01
111_E 74_L 0.62 0.01
133_R 114_K 0.61 0.01
16_R 16_K 0.61 0.01
64_I 87_G 0.61 0.01
92_G 80_I 0.61 0.01
74_Y 57_F 0.61 0.01
45_Q 14_H 0.61 0.01
72_K 11_R 0.61 0.01
89_N 68_A 0.61 0.01
23_G 77_S 0.61 0.01
29_F 38_T 0.61 0.01
9_Y 7_G 0.61 0.01
106_V 63_V 0.61 0.01
12_Q 25_W 0.60 0.01
27_V 41_A 0.60 0.01
93_Y 25_W 0.60 0.01
134_R 113_A 0.60 0.01
92_G 2_P 0.60 0.01
17_L 10_R 0.60 0.01
118_L 47_Y 0.60 0.01
127_I 75_N 0.60 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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