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OPENSEQ.org
L16 - L33
UniProt: P60489 - P35871
Length: 195
Sequences: 920
Seq/Len: 4.84
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dQ6 3v2fQ6Contact Map
2j002j01Q6 2j03Q6Contact Map
4juw4juxQ6Contact Map
4kix4kixM1 4kizM1 4kj1M1 4kj3M1Contact Map
4kj54kj5M1 4kj7M1 4kj9M1 4kjbM1Contact Map
2zjr2zjrJ1Contact Map
4btc4btdQ6Contact Map
3uyd3uyeP6 3uygP6Contact Map
4gd13r8sM1 3r8tM1Contact Map
3knh3kniQ6 3knkQ6Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
67_R 32_N 1.07 0.06
85_K 33_K 1.06 0.06
81_V 8_K 0.97 0.04
44_A 53_K 0.85 0.03
45_Q 22_A 0.85 0.03
49_A 41_P 0.84 0.03
52_V 17_K 0.83 0.03
79_L 27_K 0.75 0.02
97_V 54_I 0.73 0.02
113_Q 14_T 0.73 0.02
49_A 30_T 0.71 0.02
106_V 45_K 0.71 0.02
115_M 8_K 0.67 0.02
129_T 26_N 0.66 0.01
41_W 43_C 0.66 0.01
131_I 10_L 0.65 0.01
43_T 26_N 0.62 0.01
61_G 16_C 0.61 0.01
7_M 19_R 0.61 0.01
42_I 52_V 0.61 0.01
102_V 34_L 0.60 0.01
66_I 22_A 0.60 0.01
16_R 34_L 0.60 0.01
18_K 37_R 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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