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OPENSEQ.org
L16 - S07
UniProt: P60489 - P17291
Length: 297
Sequences: 1110
Seq/Len: 3.78
I_Prob: 0.35
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cG 3v2dQ 3v2eG 3v2fQContact Map
2j002j00G 2j01Q 2j02G 2j03QContact Map
4juw4juwG 4juxQContact Map
4kix4kixM 4kiyG 4kizM 4kj0G 4kj1M 4kj2G 4kj3M 4kj4GContact Map
4kj54kj5M 4kj6G 4kj7M 4kj8G 4kj9M 4kjaG 4kjbM 4kjcGContact Map
3ohc3ohcG 3ohdG 3ohjQ 3ohkQContact Map
3knh3knhG 3kniQ 3knjG 3knkQContact Map
3uz63uz6J 3uz7J 3uz8P 3uz9PContact Map
3oge3ogeG 3ogyG 3oh5Q 3oh7QContact Map
3uyd3uydJ 3uyeP 3uyfJ 3uygPContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
49_A 124_L 1.28 0.35
76_K 138_K 1.08 0.20
104_F 131_K 0.94 0.13
57_H 138_K 0.89 0.11
63_K 139_E 0.86 0.10
52_V 4_R 0.83 0.09
81_V 154_Y 0.83 0.09
44_A 17_V 0.81 0.08
104_F 6_R 0.81 0.08
7_M 2_A 0.80 0.08
103_M 117_A 0.80 0.08
133_R 51_Q 0.79 0.07
6_R 61_V 0.79 0.07
49_A 75_V 0.78 0.07
83_M 50_I 0.76 0.07
109_V 143_R 0.76 0.06
57_H 50_I 0.75 0.06
3_M 18_Y 0.75 0.06
41_W 4_R 0.74 0.06
49_A 83_A 0.72 0.06
72_K 59_L 0.72 0.06
113_Q 61_V 0.72 0.05
90_V 138_K 0.71 0.05
63_K 59_L 0.71 0.05
45_Q 40_A 0.70 0.05
131_I 118_V 0.69 0.05
113_Q 51_Q 0.69 0.05
38_E 36_K 0.69 0.05
79_L 149_R 0.69 0.05
52_V 128_A 0.69 0.05
132_V 130_G 0.69 0.05
35_V 26_F 0.69 0.05
81_V 113_E 0.69 0.05
43_T 116_A 0.68 0.05
85_K 25_A 0.68 0.05
14_R 131_K 0.68 0.04
36_A 104_L 0.68 0.04
126_P 30_I 0.68 0.04
74_Y 2_A 0.67 0.04
102_V 100_A 0.67 0.04
36_A 139_E 0.67 0.04
102_V 11_Q 0.67 0.04
50_A 136_K 0.67 0.04
59_R 30_I 0.66 0.04
132_V 28_N 0.66 0.04
119_R 41_R 0.66 0.04
85_K 26_F 0.66 0.04
13_Q 14_P 0.66 0.04
132_V 113_E 0.65 0.04
18_K 63_K 0.65 0.04
137_Y 105_V 0.65 0.04
11_K 1_M 0.65 0.04
138_D 149_R 0.65 0.04
68_I 136_K 0.64 0.04
36_A 102_R 0.64 0.04
34_L 48_K 0.64 0.04
27_V 50_I 0.64 0.04
9_Y 38_L 0.64 0.04
58_F 76_R 0.64 0.04
90_V 54_T 0.63 0.04
44_A 18_Y 0.63 0.04
119_R 68_N 0.63 0.04
64_I 130_G 0.63 0.04
14_R 14_P 0.63 0.04
13_Q 89_M 0.63 0.04
131_I 49_I 0.62 0.04
131_I 41_R 0.62 0.03
33_G 135_V 0.62 0.03
29_F 47_C 0.62 0.03
3_M 25_A 0.62 0.03
42_I 141_V 0.62 0.03
23_G 135_V 0.62 0.03
77_K 156_W 0.62 0.03
106_V 105_V 0.61 0.03
38_E 114_R 0.61 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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