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OPENSEQ.org
L13 - L17
UniProt: P60488 - Q9Z9H5
Length: 258
Sequences: 1349
Seq/Len: 5.23
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dNR 3v2fNRContact Map
2j002j01NR 2j03NRContact Map
4juw4juxNRContact Map
4kix4kixJN 4kizJN 4kj1JN 4kj3JNContact Map
4kj54kj5JN 4kj7JN 4kj9JN 4kjbJNContact Map
2zjr2zjrGKContact Map
4btc4btdNRContact Map
3uyd3uyeM0 3uygM0Contact Map
4gd13r8sJN 3r8tJNContact Map
3ohc3ohjNR 3ohkNRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
107_L 19_A 0.76 0.00
100_E 108_G 0.75 0.00
6_P 55_A 0.73 0.00
122_V 63_R 0.73 0.00
129_P 58_G 0.69 0.00
52_V 97_V 0.67 0.00
46_V 21_Y 0.66 0.00
119_R 103_R 0.66 0.00
71_I 114_V 0.65 0.00
126_P 81_D 0.64 0.00
1_M 67_L 0.63 0.00
114_R 61_H 0.62 0.00
116_L 87_Y 0.62 0.00
73_T 110_P 0.61 0.00
15_L 82_E 0.59 0.00
93_T 43_E 0.59 0.00
42_W 118_E 0.59 0.00
45_N 54_L 0.58 0.00
10_E 81_D 0.58 0.00
7_K 55_A 0.58 0.00
117_F 29_L 0.58 0.00
111_P 13_H 0.57 0.00
26_L 46_G 0.57 0.00
84_K 29_L 0.56 0.00
132_A 85_P 0.56 0.00
41_D 29_L 0.56 0.00
42_W 62_A 0.55 0.00
115_R 70_L 0.55 0.00
76_S 38_V 0.55 0.00
5_V 70_L 0.54 0.00
73_T 99_K 0.54 0.00
59_K 116_L 0.53 0.00
48_M 47_F 0.52 0.00
52_V 47_F 0.52 0.00
116_L 32_G 0.52 0.00
78_Y 99_K 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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