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OPENSEQ.org
L13 - L31
UniProt: P60488 - Q5SJE1
Length: 211
Sequences: 1236
Seq/Len: 6.06
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dN4 3v2fN4Contact Map
2j002j01N4 2j03N4Contact Map
4juw4juxN4Contact Map
4btc4btdN4Contact Map
3uyd3uyeM4 3uygM4Contact Map
3knh3kniN4 3knkN4Contact Map
3ohc3ohjN4 3ohkN4Contact Map
3ohy3ohzN4 3oi1N4Contact Map
3v223v23N4 3v25N4Contact Map
3uz63uz8M4 3uz9M4Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
61_R 62_R 0.76 0.00
137_K 61_R 0.75 0.00
107_L 62_R 0.73 0.00
83_K 62_R 0.71 0.00
75_Y 49_F 0.68 0.00
97_R 56_V 0.68 0.00
26_L 31_I 0.65 0.00
69_Q 23_E 0.65 0.00
23_L 43_Y 0.63 0.00
65_K 58_R 0.63 0.00
42_W 46_Q 0.63 0.00
21_K 43_Y 0.62 0.00
118_K 21_V 0.62 0.00
74_R 25_Y 0.60 0.00
17_D 4_G 0.60 0.00
73_T 62_R 0.59 0.00
121_K 51_D 0.59 0.00
127_D 34_E 0.59 0.00
129_P 58_R 0.58 0.00
70_K 58_R 0.57 0.00
75_Y 5_I 0.57 0.00
93_T 48_R 0.57 0.00
12_R 35_V 0.57 0.00
91_L 62_R 0.56 0.00
82_L 33_V 0.56 0.00
60_I 62_R 0.56 0.00
117_F 51_D 0.54 0.00
115_R 2_K 0.54 0.00
111_P 3_E 0.54 0.00
114_R 13_R 0.53 0.00
32_T 60_Q 0.53 0.00
42_W 24_T 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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