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OPENSEQ.org
L13 - L18
UniProt: P60488 - Q5SHQ4
Length: 252
Sequences: 1297
Seq/Len: 5.19
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoJNContact Map
1vq81vq8JNContact Map
1vqp1vqpJNContact Map
1vqm1vqmJNContact Map
1vql1vqlJNContact Map
1vqk1vqkJNContact Map
1yhq1yhqJNContact Map
1s721s72JNContact Map
1vq91vq9JNContact Map
1vqn1vqnJNContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
72_Y 36_Y 0.85 0.00
139_E 18_I 0.75 0.00
110_G 40_I 0.74 0.00
118_K 17_R 0.71 0.00
115_R 86_A 0.70 0.00
75_Y 55_A 0.67 0.00
72_Y 92_Y 0.66 0.00
63_T 66_A 0.62 0.00
27_A 9_R 0.62 0.00
71_I 78_L 0.61 0.00
103_V 71_R 0.61 0.00
43_T 53_S 0.61 0.00
76_S 6_A 0.60 0.00
97_R 60_G 0.59 0.00
129_P 100_A 0.59 0.00
121_K 86_A 0.58 0.00
69_Q 21_T 0.58 0.00
55_V 71_R 0.58 0.00
4_Y 9_R 0.58 0.00
75_Y 100_A 0.57 0.00
22_T 111_E 0.57 0.00
97_R 30_R 0.57 0.00
62_V 67_R 0.56 0.00
84_K 19_K 0.56 0.00
52_V 45_G 0.56 0.00
139_E 12_F 0.55 0.00
14_V 82_I 0.55 0.00
132_A 103_E 0.55 0.00
72_Y 112_F 0.55 0.00
103_V 56_L 0.55 0.00
79_P 52_S 0.55 0.00
76_S 69_V 0.55 0.00
42_W 58_L 0.55 0.00
78_Y 39_I 0.54 0.00
114_R 76_K 0.54 0.00
117_F 93_K 0.53 0.00
102_A 82_I 0.53 0.00
40_P 111_E 0.53 0.00
6_P 41_D 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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