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OPENSEQ.org
L13 - L22
UniProt: P60488 - Q5SHP3
Length: 253
Sequences: 1520
Seq/Len: 6.06
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoJRContact Map
1vq81vq8JRContact Map
1vqp1vqpJRContact Map
1vqm1vqmJRContact Map
1vql1vqlJRContact Map
1vqk1vqkJRContact Map
1yhq1yhqJRContact Map
1s721s72JRContact Map
1vq91vq9JRContact Map
1vqn1vqnJRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
55_V 49_K 0.84 0.00
73_T 88_R 0.78 0.00
75_Y 88_R 0.75 0.00
71_I 30_E 0.68 0.00
94_H 4_K 0.63 0.00
77_G 107_L 0.63 0.00
110_G 97_K 0.62 0.00
79_P 92_R 0.60 0.00
129_P 2_E 0.60 0.00
107_L 56_A 0.59 0.00
16_I 83_K 0.58 0.00
67_L 47_V 0.58 0.00
42_W 6_I 0.57 0.00
82_L 17_V 0.57 0.00
52_V 21_V 0.57 0.00
129_P 73_A 0.57 0.00
20_G 68_R 0.57 0.00
101_H 74_A 0.56 0.00
129_P 66_E 0.56 0.00
107_L 29_L 0.55 0.00
88_E 2_E 0.55 0.00
121_K 45_Y 0.55 0.00
105_G 100_T 0.54 0.00
62_V 76_V 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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