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OPENSEQ.org
L13 - L34
UniProt: P60488 - P80340
Length: 189
Sequences: 989
Seq/Len: 5.35
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dN7 3v2fN7Contact Map
2j002j01N7 2j03N7Contact Map
4juw4juxN7Contact Map
4kix4kixJ2 4kizJ2 4kj1J2 4kj3J2Contact Map
4kj54kj5J2 4kj7J2 4kj9J2 4kjbJ2Contact Map
2zjr2zjrG2Contact Map
4btc4btdN7Contact Map
3uyd3uyeM7 3uygM7Contact Map
4gd13r8sJ2 3r8tJ2Contact Map
3ohc3ohjN7 3ohkN7Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
114_R 19_R 0.87 0.00
52_V 10_R 0.86 0.00
136_E 40_W 0.79 0.00
137_K 30_V 0.75 0.00
2_K 12_R 0.69 0.00
82_L 8_N 0.67 0.00
61_R 32_K 0.67 0.00
90_M 43_T 0.67 0.00
134_R 29_K 0.65 0.00
110_G 28_R 0.63 0.00
83_K 10_R 0.63 0.00
23_L 11_K 0.63 0.00
140_V 11_K 0.61 0.00
29_K 31_L 0.61 0.00
8_Q 25_P 0.61 0.00
122_V 33_R 0.59 0.00
104_K 41_R 0.58 0.00
87_L 15_T 0.58 0.00
65_K 32_K 0.57 0.00
8_Q 15_T 0.57 0.00
140_V 36_Q 0.57 0.00
77_G 15_T 0.57 0.00
9_V 30_V 0.57 0.00
137_K 1_M 0.57 0.00
32_T 19_R 0.56 0.00
78_Y 7_P 0.56 0.00
113_G 11_K 0.56 0.00
110_G 12_R 0.55 0.00
87_L 8_N 0.55 0.00
72_Y 33_R 0.54 0.00
136_E 44_P 0.54 0.00
8_Q 5_W 0.53 0.00
58_D 24_T 0.53 0.00
90_M 5_W 0.53 0.00
30_I 19_R 0.52 0.00
76_S 10_R 0.52 0.00
73_T 14_K 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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