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OPENSEQ.org
L13 - L21
UniProt: P60488 - P60492
Length: 241
Sequences: 1294
Seq/Len: 5.37
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dNV 3v2fNVContact Map
2j002j01NV 2j03NVContact Map
4juw4juxNVContact Map
4kix4kixJR 4kizJR 4kj1JR 4kj3JRContact Map
4kj54kj5JR 4kj7JR 4kj9JR 4kjbJRContact Map
2zjr2zjrGOContact Map
4btc4btdNVContact Map
3uyd3uyeM2 3uygM2Contact Map
4gd13r8sJR 3r8tJRContact Map
3knh3kniNV 3knkNVContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
5_V 4_I 0.94 0.01
4_Y 79_V 0.79 0.01
86_P 96_I 0.76 0.01
7_K 30_G 0.75 0.01
20_G 70_I 0.75 0.01
110_G 85_K 0.69 0.01
75_Y 99_I 0.67 0.01
105_G 76_K 0.66 0.01
89_K 13_R 0.65 0.01
33_L 67_G 0.62 0.00
19_E 58_V 0.61 0.00
105_G 4_I 0.60 0.00
8_Q 83_R 0.60 0.00
42_W 90_P 0.59 0.00
84_K 62_L 0.58 0.00
28_T 81_Y 0.57 0.00
116_L 16_P 0.57 0.00
76_S 77_A 0.57 0.00
87_L 78_K 0.56 0.00
21_K 72_V 0.56 0.00
129_P 52_V 0.56 0.00
117_F 29_P 0.55 0.00
15_L 77_A 0.54 0.00
11_P 61_V 0.54 0.00
4_Y 78_K 0.54 0.00
33_L 78_K 0.53 0.00
1_M 30_G 0.53 0.00
57_A 33_V 0.53 0.00
68_E 44_K 0.52 0.00
87_L 75_F 0.52 0.00
132_A 68_K 0.52 0.00
51_F 70_I 0.52 0.00
55_V 36_P 0.52 0.00
79_P 6_K 0.51 0.00
102_A 84_K 0.51 0.00
41_D 41_G 0.51 0.00
98_V 92_T 0.51 0.00
76_S 79_V 0.51 0.00
137_K 96_I 0.51 0.00
119_R 8_G 0.50 0.00
8_Q 5_V 0.50 0.00
30_I 38_L 0.49 0.00
46_V 39_L 0.49 0.00
3_T 49_T 0.49 0.00
28_T 100_R 0.49 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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