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OPENSEQ.org
L02 - L18
UniProt: P60405 - Q5SHQ4
Length: 388
Sequences: 1133
Seq/Len: 2.94
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoANContact Map
1vq81vq8ANContact Map
1vqp1vqpANContact Map
1vqm1vqmANContact Map
1vql1vqlANContact Map
1vqk1vqkANContact Map
1yhq1yhqANContact Map
1s721s72ANContact Map
1vq91vq9ANContact Map
1vqn1vqnANContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
90_A 98_V 0.89 0.00
13_R 66_A 0.88 0.00
184_K 84_Q 0.86 0.00
258_K 90_G 0.81 0.00
106_I 41_D 0.78 0.00
124_P 93_K 0.76 0.00
103_R 82_I 0.74 0.00
15_F 104_G 0.73 0.00
255_K 11_K 0.72 0.00
193_V 100_A 0.71 0.00
248_S 77_A 0.70 0.00
126_Q 32_L 0.66 0.00
31_K 41_D 0.66 0.00
261_K 104_G 0.65 0.00
65_I 16_N 0.65 0.00
168_R 75_E 0.65 0.00
142_V 80_L 0.64 0.00
145_V 24_L 0.64 0.00
153_A 81_G 0.64 0.00
10_T 37_A 0.62 0.00
81_A 3_R 0.61 0.00
168_R 57_K 0.60 0.00
83_E 49_V 0.60 0.00
223_G 34_H 0.60 0.00
202_K 27_S 0.59 0.00
41_G 32_L 0.59 0.00
89_S 58_L 0.58 0.00
158_A 75_E 0.58 0.00
162_S 71_R 0.58 0.00
212_S 78_L 0.58 0.00
13_R 9_R 0.58 0.00
272_A 65_V 0.58 0.00
65_I 8_E 0.57 0.00
31_K 42_D 0.57 0.00
82_I 17_R 0.56 0.00
7_K 18_I 0.56 0.00
214_W 36_Y 0.56 0.00
202_K 55_A 0.56 0.00
155_L 84_Q 0.56 0.00
165_I 54_L 0.56 0.00
127_V 100_A 0.55 0.00
193_V 18_I 0.55 0.00
17_T 49_V 0.55 0.00
3_V 94_Y 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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