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OPENSEQ.org
L02 - L24
UniProt: P60405 - Q5SHP9
Length: 386
Sequences: 1234
Seq/Len: 3.27
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoATContact Map
1vq81vq8ATContact Map
1vqp1vqpATContact Map
1vqm1vqmATContact Map
1vql1vqlATContact Map
1vqk1vqkATContact Map
1yhq1yhqATContact Map
1s721s72ATContact Map
1vq91vq9ATContact Map
1vqn1vqnATContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
74_G 86_R 0.83 0.00
147_L 20_Y 0.82 0.00
158_A 45_V 0.76 0.00
123_A 31_L 0.75 0.00
268_R 90_L 0.72 0.00
201_H 81_K 0.72 0.00
122_D 54_K 0.70 0.00
111_L 47_K 0.70 0.00
248_S 40_E 0.69 0.00
82_I 31_L 0.68 0.00
162_S 38_I 0.68 0.00
269_F 98_V 0.68 0.00
273_R 47_K 0.67 0.00
115_Q 29_E 0.66 0.00
126_Q 22_G 0.64 0.00
177_L 35_Y 0.64 0.00
49_I 50_R 0.63 0.00
75_I 29_E 0.63 0.00
155_L 27_V 0.61 0.00
65_I 38_I 0.60 0.00
153_A 74_P 0.59 0.00
130_A 96_I 0.59 0.00
45_N 99_C 0.58 0.00
254_T 26_K 0.58 0.00
90_A 24_V 0.57 0.00
34_V 106_L 0.57 0.00
135_F 88_K 0.56 0.00
153_A 75_I 0.56 0.00
178_P 76_C 0.56 0.00
65_I 67_L 0.56 0.00
177_L 30_V 0.55 0.00
233_H 87_K 0.55 0.00
241_P 69_A 0.54 0.00
119_A 61_I 0.54 0.00
253_Q 28_K 0.53 0.00
269_F 66_P 0.53 0.00
133_L 64_E 0.53 0.00
178_P 99_C 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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