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OPENSEQ.org
L02 - L23
UniProt: P60405 - Q5SHP0
Length: 372
Sequences: 1434
Seq/Len: 3.91
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoASContact Map
1vq81vq8ASContact Map
1vqp1vqpASContact Map
1vqm1vqmASContact Map
1vql1vqlASContact Map
1vqk1vqkASContact Map
1yhq1yhqASContact Map
1s721s72ASContact Map
1vq91vq9ASContact Map
1vqn1vqnASContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
41_G 75_D 0.78 0.00
51_V 94_G 0.74 0.00
70_W 70_L 0.73 0.00
254_T 27_T 0.69 0.00
158_A 85_P 0.68 0.00
93_A 54_V 0.67 0.00
144_A 55_N 0.66 0.00
261_K 91_A 0.66 0.00
145_V 8_I 0.65 0.00
82_I 33_K 0.64 0.00
221_V 9_L 0.64 0.00
16_M 21_F 0.64 0.00
176_R 12_V 0.64 0.00
45_N 29_W 0.64 0.00
200_D 77_K 0.63 0.00
166_Q 67_G 0.62 0.00
3_V 83_V 0.61 0.00
156_A 25_K 0.61 0.00
74_G 12_V 0.61 0.00
12_S 21_F 0.60 0.00
95_L 55_N 0.60 0.00
193_V 53_K 0.59 0.00
17_T 78_K 0.59 0.00
230_D 13_L 0.59 0.00
257_L 68_R 0.59 0.00
60_R 53_K 0.59 0.00
205_V 22_A 0.59 0.00
214_W 10_A 0.59 0.00
153_A 58_H 0.59 0.00
130_A 13_L 0.58 0.00
55_G 71_G 0.58 0.00
241_P 90_E 0.58 0.00
258_K 70_L 0.57 0.00
214_W 40_K 0.57 0.00
6_F 6_D 0.57 0.00
205_V 75_D 0.57 0.00
186_H 9_L 0.57 0.00
5_K 88_K 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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