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OPENSEQ.org
L02 - L20
UniProt: P60405 - P60491
Length: 394
Sequences: 1219
Seq/Len: 3.10
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dDU 3v2fDUContact Map
2j002j01DU 2j03DUContact Map
4juw4juxDUContact Map
4kix4kixCQ 4kizCQ 4kj1CQ 4kj3CQContact Map
4kj54kj5CQ 4kj7CQ 4kj9CQ 4kjbCQContact Map
2zjr2zjrANContact Map
4btc4btdDUContact Map
3uyd3uyeD1 3uygD1Contact Map
4gd13r8sCQ 3r8tCQContact Map
3ohc3ohjDU 3ohkDUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
225_A 51_K 0.90 0.00
245_P 40_F 0.88 0.00
168_R 43_G 0.81 0.00
197_G 68_A 0.81 0.00
16_M 41_A 0.80 0.00
211_R 96_A 0.79 0.00
225_A 56_D 0.78 0.00
249_P 33_R 0.78 0.00
158_A 116_A 0.78 0.00
272_A 24_Y 0.77 0.00
176_R 14_H 0.73 0.00
105_I 68_A 0.73 0.00
241_P 40_F 0.73 0.00
255_K 36_R 0.73 0.00
225_A 12_R 0.72 0.00
214_W 25_W 0.72 0.00
65_I 111_E 0.70 0.00
170_G 73_G 0.70 0.00
18_V 6_T 0.69 0.00
166_Q 98_L 0.69 0.00
192_T 110_V 0.68 0.00
126_Q 81_H 0.68 0.00
24_I 43_G 0.67 0.00
106_I 105_V 0.67 0.00
185_V 73_G 0.67 0.00
263_R 2_P 0.67 0.00
193_V 52_R 0.65 0.00
10_T 74_L 0.65 0.00
153_A 7_G 0.65 0.00
48_R 38_T 0.64 0.00
201_H 38_T 0.63 0.00
254_T 29_S 0.63 0.00
11_P 33_R 0.63 0.00
65_I 101_R 0.62 0.00
78_K 87_G 0.62 0.00
10_T 14_H 0.62 0.00
195_A 53_R 0.61 0.00
48_R 78_T 0.61 0.00
205_V 90_V 0.60 0.00
49_I 33_R 0.60 0.00
7_K 45_Y 0.59 0.00
117_V 115_A 0.59 0.00
242_R 40_F 0.59 0.00
3_V 73_G 0.59 0.00
240_A 41_A 0.59 0.00
168_R 97_D 0.59 0.00
262_R 21_A 0.58 0.00
98_V 110_V 0.58 0.00
111_L 78_T 0.58 0.00
271_I 100_V 0.58 0.00
99_D 65_I 0.58 0.00
7_K 56_D 0.58 0.00
168_R 44_N 0.58 0.00
173_V 11_R 0.57 0.00
165_I 25_W 0.57 0.00
264_K 9_V 0.57 0.00
225_A 20_L 0.56 0.00
89_S 75_N 0.56 0.00
166_Q 29_S 0.56 0.00
28_E 85_K 0.56 0.00
106_I 114_K 0.56 0.00
254_T 9_V 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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