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OPENSEQ.org
L02 - L19
UniProt: P60405 - P60490
Length: 422
Sequences: 1076
Seq/Len: 2.75
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dDT 3v2fDTContact Map
2j002j01DT 2j03DTContact Map
4juw4juxDTContact Map
4kix4kixCP 4kizCP 4kj1CP 4kj3CPContact Map
4kj54kj5CP 4kj7CP 4kj9CP 4kjbCPContact Map
2zjr2zjrAMContact Map
4btc4btdDTContact Map
3uyd3uyeDR 3uygDRContact Map
4gd13r8sCP 3r8tCPContact Map
3ohc3ohjDT 3ohkDTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
68_K 45_F 1.10 0.02
240_A 98_K 0.98 0.01
142_V 90_Q 0.84 0.01
275_K 113_K 0.84 0.01
176_R 100_Y 0.82 0.01
175_L 85_K 0.81 0.01
196_V 56_G 0.78 0.01
168_R 86_I 0.72 0.01
130_A 74_R 0.71 0.01
12_S 112_R 0.70 0.01
65_I 78_L 0.70 0.01
253_Q 27_T 0.70 0.01
156_A 7_I 0.69 0.01
258_K 52_I 0.68 0.01
203_N 32_Y 0.68 0.01
173_V 5_A 0.67 0.01
26_K 34_V 0.67 0.01
254_T 65_K 0.67 0.01
193_V 108_R 0.66 0.01
120_G 49_V 0.66 0.01
212_S 23_R 0.65 0.01
138_V 39_R 0.65 0.01
267_S 6_L 0.65 0.01
39_K 28_V 0.65 0.01
90_A 81_P 0.64 0.01
21_F 49_V 0.64 0.01
3_V 5_A 0.64 0.01
119_A 80_S 0.63 0.01
54_R 93_R 0.63 0.01
261_K 104_N 0.63 0.01
164_Q 20_P 0.62 0.01
258_K 14_Y 0.62 0.01
158_A 8_K 0.62 0.01
76_P 35_K 0.62 0.01
24_I 70_V 0.62 0.01
73_V 75_I 0.61 0.01
166_Q 15_V 0.61 0.01
200_D 80_S 0.61 0.01
130_A 45_F 0.61 0.01
168_R 70_V 0.61 0.00
200_D 42_I 0.61 0.00
49_I 24_P 0.60 0.00
34_V 6_L 0.60 0.00
4_K 53_R 0.60 0.00
58_H 34_V 0.60 0.00
244_R 90_Q 0.60 0.00
225_A 84_Q 0.60 0.00
118_V 87_D 0.60 0.00
70_W 113_K 0.60 0.00
70_W 75_I 0.59 0.00
89_S 6_L 0.58 0.00
82_I 100_Y 0.58 0.00
53_F 14_Y 0.58 0.00
153_A 44_D 0.57 0.00
45_N 86_I 0.57 0.00
188_E 34_V 0.57 0.00
10_T 53_R 0.57 0.00
59_K 86_I 0.57 0.00
18_V 65_K 0.57 0.00
248_S 10_V 0.56 0.00
185_V 108_R 0.56 0.00
76_P 83_I 0.56 0.00
221_V 53_R 0.56 0.00
273_R 71_G 0.56 0.00
180_G 56_G 0.56 0.00
133_L 58_N 0.56 0.00
60_R 50_I 0.56 0.00
225_A 75_I 0.56 0.00
171_D 6_L 0.56 0.00
193_V 96_R 0.56 0.00
271_I 72_V 0.56 0.00
126_Q 112_R 0.56 0.00
46_Q 104_N 0.55 0.00
180_G 70_V 0.55 0.00
5_K 113_K 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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