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OPENSEQ.org

COBC - IOJAP
UniProt: P52086 - P0AAT6
Length: 308
Sequences: 208
Seq/Len: 0.70
I_Prob: 0.01

COBC - Alpha-ribazole phosphatase
Paralog alert: 0.82 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: COBC GPMA GPMB
IOJAP - Ribosomal silencing factor RsfS
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: IOJAP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_E 45_S 1.59 0.01
10_E 39_I 1.48 0.01
72_P 83_G 1.42 0.01
164_P 75_A 1.42 0.01
95_L 94_S 1.35 0.00
141_Y 78_I 1.33 0.00
71_L 55_V 1.29 0.00
144_I 25_L 1.25 0.00
49_L 83_G 1.24 0.00
66_L 67_L 1.19 0.00
29_A 101_E 1.17 0.00
164_P 60_R 1.17 0.00
148_S 23_I 1.16 0.00
5_L 50_S 1.11 0.00
97_Q 89_V 1.11 0.00
162_G 96_R 1.10 0.00
84_F 18_K 1.09 0.00
134_R 45_S 1.08 0.00
173_V 16_D 1.08 0.00
152_V 55_V 1.07 0.00
3_L 22_I 1.06 0.00
152_V 24_A 1.06 0.00
105_A 57_Q 1.05 0.00
39_H 99_E 1.04 0.00
120_G 40_C 1.04 0.00
164_P 36_C 1.03 0.00
99_D 19_G 1.02 0.00
41_L 67_L 1.01 0.00
156_L 63_G 1.01 0.00
12_Q 97_L 1.01 0.00
118_G 18_K 1.00 0.00
88_E 73_N 0.99 0.00
190_L 33_I 0.99 0.00
173_V 43_T 0.99 0.00
37_N 25_L 0.99 0.00
123_A 25_L 0.99 0.00
33_E 97_L 0.98 0.00
128_V 67_L 0.98 0.00
54_E 56_V 0.97 0.00
101_E 38_I 0.97 0.00
144_I 82_L 0.96 0.00
84_F 24_A 0.95 0.00
42_L 19_G 0.95 0.00
148_S 24_A 0.95 0.00
145_L 15_D 0.94 0.00
99_D 62_A 0.94 0.00
28_T 101_E 0.94 0.00
100_A 75_A 0.94 0.00
125_S 28_Q 0.93 0.00
148_S 101_E 0.93 0.00
80_N 56_V 0.93 0.00
123_A 85_V 0.92 0.00
129_E 22_I 0.92 0.00
116_T 16_D 0.92 0.00
50_V 85_V 0.92 0.00
177_C 19_G 0.92 0.00
176_G 55_V 0.91 0.00
65_V 82_L 0.91 0.00
182_D 19_G 0.91 0.00
170_H 21_D 0.90 0.00
64_L 15_D 0.90 0.00
190_L 66_P 0.90 0.00
32_I 38_I 0.89 0.00
158_A 21_D 0.89 0.00
123_A 73_N 0.89 0.00
151_G 21_D 0.89 0.00
168_M 104_W 0.89 0.00
183_I 18_K 0.89 0.00
148_S 25_L 0.88 0.00
164_P 58_E 0.88 0.00
156_L 38_I 0.88 0.00
3_L 44_S 0.87 0.00
108_N 101_E 0.87 0.00
128_V 16_D 0.86 0.00
153_L 40_C 0.86 0.00
5_L 64_L 0.86 0.00
167_A 29_G 0.86 0.00
176_G 42_G 0.86 0.00
70_Q 31_S 0.85 0.00
88_E 55_V 0.85 0.00
69_R 83_G 0.85 0.00
146_V 25_L 0.85 0.00
160_L 27_V 0.85 0.00
54_E 66_P 0.85 0.00
37_N 18_K 0.85 0.00
30_R 34_T 0.84 0.00
142_Q 43_T 0.84 0.00
9_G 80_V 0.84 0.00
32_I 101_E 0.84 0.00
158_A 75_A 0.83 0.00
181_I 41_T 0.83 0.00
144_I 96_R 0.83 0.00
90_R 101_E 0.83 0.00
177_C 45_S 0.83 0.00
66_L 102_K 0.83 0.00
60_H 44_S 0.82 0.00
87_W 48_V 0.82 0.00
44_G 67_L 0.82 0.00
164_P 67_L 0.82 0.00
15_I 40_C 0.82 0.00
154_S 72_E 0.82 0.00
160_L 97_L 0.82 0.00
93_R 61_A 0.82 0.00
65_V 53_D 0.81 0.00
39_H 97_L 0.81 0.00
138_F 61_A 0.81 0.00
26_P 102_K 0.81 0.00
59_Q 16_D 0.81 0.00
103_Y 39_I 0.81 0.00
54_E 103_L 0.81 0.00
80_N 19_G 0.80 0.00
71_L 42_G 0.80 0.00
71_L 101_E 0.80 0.00
6_I 65_L 0.80 0.00
70_Q 86_I 0.80 0.00
152_V 15_D 0.79 0.00
100_A 69_V 0.79 0.00
102_N 6_L 0.79 0.00
161_I 39_I 0.79 0.00
153_L 75_A 0.79 0.00
137_E 50_S 0.79 0.00
33_E 72_E 0.79 0.00
189_T 28_Q 0.79 0.00
94_D 80_V 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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