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OPENSEQ.org

RDGB - YGGW
UniProt: P52061 - P52062
Length: 575
Sequences: 406
Seq/Len: 0.71
I_Prob: 0.00

RDGB - dITP/XTP pyrophosphatase
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RDGB
YGGW - Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW
Paralog alert: 0.56 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: HEMN YGGW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
52_L 285_R 1.49 0.00
34_L 118_V 1.46 0.00
123_V 8_S 1.44 0.00
15_R 174_E 1.30 0.00
72_L 178_G 1.22 0.00
52_L 351_L 1.19 0.00
84_Y 241_Y 1.19 0.00
66_I 248_C 1.16 0.00
15_R 47_L 1.11 0.00
191_L 247_Q 1.10 0.00
122_L 93_D 1.07 0.00
8_T 316_F 1.02 0.00
124_Y 272_T 1.02 0.00
164_S 48_D 1.02 0.00
169_A 88_L 1.01 0.00
2_Q 96_I 1.01 0.00
42_T 195_Q 1.00 0.00
175_E 11_I 0.98 0.00
15_R 59_V 0.97 0.00
52_L 195_Q 0.97 0.00
180_I 271_V 0.96 0.00
136_C 290_F 0.95 0.00
138_G 238_T 0.95 0.00
26_L 108_D 0.94 0.00
134_L 288_R 0.94 0.00
43_G 195_Q 0.94 0.00
48_E 253_N 0.93 0.00
114_R 271_V 0.93 0.00
73_A 167_G 0.93 0.00
99_L 198_I 0.93 0.00
66_I 160_F 0.93 0.00
80_A 113_Y 0.93 0.00
148_P 351_L 0.93 0.00
122_L 98_M 0.92 0.00
159_I 89_P 0.92 0.00
21_L 119_N 0.92 0.00
35_G 96_I 0.91 0.00
8_T 47_L 0.91 0.00
135_V 298_S 0.91 0.00
125_L 198_I 0.91 0.00
180_I 306_D 0.90 0.00
22_S 109_R 0.90 0.00
6_L 80_L 0.90 0.00
43_G 43_L 0.90 0.00
17_L 61_T 0.89 0.00
3_K 131_E 0.89 0.00
88_Y 119_N 0.89 0.00
34_L 293_G 0.89 0.00
188_K 86_A 0.89 0.00
9_G 77_M 0.89 0.00
83_I 210_V 0.89 0.00
88_Y 72_L 0.88 0.00
67_A 333_L 0.88 0.00
11_V 97_T 0.88 0.00
4_V 112_D 0.88 0.00
119_H 170_D 0.88 0.00
29_V 121_I 0.88 0.00
106_M 154_G 0.88 0.00
154_F 366_L 0.87 0.00
187_L 31_K 0.87 0.00
188_K 231_A 0.87 0.00
118_F 195_Q 0.87 0.00
125_L 109_R 0.87 0.00
129_E 84_V 0.86 0.00
137_H 64_I 0.86 0.00
188_K 182_Q 0.86 0.00
1_M 248_C 0.86 0.00
180_I 238_T 0.85 0.00
17_L 344_E 0.85 0.00
141_P 306_D 0.85 0.00
148_P 115_R 0.85 0.00
43_G 283_K 0.85 0.00
168_T 33_E 0.85 0.00
30_A 119_N 0.85 0.00
83_I 281_T 0.85 0.00
42_T 224_G 0.84 0.00
149_A 114_Q 0.84 0.00
4_V 227_L 0.84 0.00
169_A 98_M 0.84 0.00
27_D 33_E 0.84 0.00
30_A 215_D 0.84 0.00
190_L 222_E 0.84 0.00
143_V 72_L 0.84 0.00
25_G 191_L 0.84 0.00
24_F 360_I 0.84 0.00
164_S 346_I 0.83 0.00
42_T 281_T 0.83 0.00
38_S 174_E 0.83 0.00
45_T 54_A 0.83 0.00
179_A 242_A 0.83 0.00
33_D 109_R 0.83 0.00
11_V 219_D 0.82 0.00
120_C 47_L 0.82 0.00
171_E 131_E 0.82 0.00
139_S 153_S 0.82 0.00
190_L 176_A 0.82 0.00
48_E 43_L 0.82 0.00
11_V 291_M 0.82 0.00
3_K 238_T 0.82 0.00
8_T 181_R 0.82 0.00
133_P 253_N 0.81 0.00
169_A 149_A 0.81 0.00
138_G 29_A 0.81 0.00
168_T 292_Q 0.81 0.00
19_S 45_N 0.81 0.00
31_Q 270_K 0.81 0.00
8_T 258_G 0.81 0.00
118_F 207_R 0.81 0.00
180_I 125_V 0.81 0.00
4_V 79_T 0.80 0.00
8_T 121_I 0.80 0.00
29_V 98_M 0.80 0.00
151_T 230_A 0.80 0.00
138_G 365_K 0.79 0.00
22_S 245_G 0.79 0.00
83_I 129_S 0.79 0.00
149_A 172_S 0.79 0.00
156_Y 213_D 0.79 0.00
90_G 169_P 0.79 0.00
189_L 125_V 0.79 0.00
191_L 291_M 0.79 0.00
4_V 334_C 0.79 0.00
112_D 249_Q 0.79 0.00
23_D 323_P 0.79 0.00
147_E 2_V 0.78 0.00
39_A 115_R 0.78 0.00
157_D 100_A 0.78 0.00
19_S 231_A 0.78 0.00
21_L 41_Q 0.78 0.00
14_V 296_L 0.78 0.00
138_G 94_A 0.78 0.00
4_V 158_R 0.78 0.00
120_C 351_L 0.77 0.00
83_I 205_G 0.77 0.00
102_L 103_G 0.77 0.00
137_H 144_E 0.77 0.00
154_F 169_P 0.77 0.00
120_C 149_A 0.77 0.00
21_L 217_L 0.77 0.00
184_G 238_T 0.77 0.00
35_G 231_A 0.77 0.00
8_T 142_P 0.77 0.00
3_K 198_I 0.77 0.00
80_A 367_F 0.77 0.00
43_G 224_G 0.76 0.00
123_V 89_P 0.76 0.00
105_T 9_L 0.76 0.00
9_G 224_G 0.76 0.00
123_V 112_D 0.76 0.00
22_S 45_N 0.76 0.00
118_F 235_Q 0.76 0.00
26_L 32_G 0.76 0.00
37_D 8_S 0.76 0.00
72_L 80_L 0.76 0.00
4_V 306_D 0.76 0.00
88_Y 277_R 0.75 0.00
21_L 84_V 0.75 0.00
51_I 253_N 0.75 0.00
175_E 231_A 0.75 0.00
59_K 84_V 0.75 0.00
189_L 305_T 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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