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OPENSEQ.org

MTOX - XYLB
UniProt: P40874 - P09099
Length: 856
Sequences: 1074
Seq/Len: 1.29
I_Prob: 0.00

MTOX - N-methyl-L-tryptophan oxidase
Paralog alert: 0.81 [within 20: 0.13] - ratio of genomes with paralogs
Cluster includes: DADA LHGO MTOX PUUB
XYLB - Xylulose kinase
Paralog alert: 0.75 [within 20: 0.17] - ratio of genomes with paralogs
Cluster includes: ARAB FUCK GLPK LSRK LYXK RHAB XYLB YGCE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
27_N 19_E 0.94 0.00
197_I 68_V 0.94 0.00
173_T 407_A 0.88 0.00
32_D 69_K 0.84 0.00
135_Y 409_I 0.82 0.00
137_G 70_A 0.82 0.00
7_I 169_S 0.81 0.00
117_L 466_Q 0.81 0.00
180_D 470_E 0.79 0.00
90_I 154_D 0.77 0.00
125_R 414_L 0.77 0.00
115_E 368_G 0.77 0.00
86_R 338_T 0.76 0.00
161_E 44_D 0.76 0.00
190_E 44_D 0.75 0.00
26_L 24_V 0.75 0.00
196_A 428_A 0.74 0.00
115_E 62_Q 0.74 0.00
8_I 16_L 0.74 0.00
31_T 194_L 0.74 0.00
117_L 5_I 0.73 0.00
190_E 378_D 0.73 0.00
22_T 361_L 0.73 0.00
211_L 18_N 0.73 0.00
8_I 67_D 0.72 0.00
22_T 140_P 0.72 0.00
197_I 208_I 0.72 0.00
29_L 306_G 0.72 0.00
111_Q 398_R 0.72 0.00
288_A 312_A 0.71 0.00
7_I 386_K 0.71 0.00
5_L 227_V 0.70 0.00
194_K 22_E 0.70 0.00
221_A 463_A 0.70 0.00
191_Y 467_P 0.69 0.00
290_P 407_A 0.69 0.00
207_L 378_D 0.69 0.00
67_A 229_A 0.69 0.00
7_I 460_Q 0.69 0.00
173_T 446_L 0.68 0.00
276_V 453_Q 0.68 0.00
197_I 106_T 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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