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OPENSEQ.org

RFBX - WZZB
UniProt: P37746 - P76372
Length: 741
Sequences: 816
Seq/Len: 1.14
I_Prob: 0.00

RFBX - Putative O-antigen transporter
Paralog alert: 0.91 [within 20: 0.17] - ratio of genomes with paralogs
Cluster includes: DINF MDTK MURJ RFBX WZXC WZXE YEEO YGHQ
WZZB - Chain length determinant protein
Paralog alert: 0.67 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: FEPE WZZB WZZE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
211_R 40_V 1.23 0.00
236_I 120_T 1.17 0.00
394_A 24_L 1.00 0.00
102_F 176_K 0.96 0.00
275_I 144_A 0.92 0.00
225_S 62_I 0.91 0.00
63_F 218_Q 0.90 0.00
102_F 36_I 0.89 0.00
105_S 201_Q 0.88 0.00
128_V 58_S 0.88 0.00
105_S 295_K 0.86 0.00
160_P 119_L 0.86 0.00
322_P 131_P 0.85 0.00
307_I 134_V 0.84 0.00
343_L 87_K 0.84 0.00
304_F 58_S 0.84 0.00
180_S 301_L 0.84 0.00
192_A 309_V 0.84 0.00
103_L 40_V 0.84 0.00
119_I 73_Y 0.83 0.00
101_I 96_I 0.83 0.00
216_D 142_E 0.83 0.00
315_L 301_L 0.82 0.00
227_I 284_P 0.81 0.00
93_I 118_K 0.81 0.00
270_A 62_I 0.81 0.00
32_Y 291_D 0.81 0.00
322_P 103_F 0.81 0.00
77_S 40_V 0.80 0.00
391_T 116_R 0.80 0.00
116_H 314_V 0.80 0.00
56_I 309_V 0.80 0.00
119_I 267_S 0.80 0.00
13_I 96_I 0.80 0.00
126_A 50_A 0.79 0.00
132_I 58_S 0.79 0.00
256_I 19_D 0.79 0.00
378_P 121_I 0.79 0.00
259_A 237_L 0.79 0.00
356_N 17_Q 0.79 0.00
393_L 193_K 0.79 0.00
37_L 207_A 0.79 0.00
70_S 200_I 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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