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OPENSEQ.org

RMLC - RMLD
UniProt: P37745 - P37760
Length: 484
Sequences: 1621
Seq/Len: 3.43
I_Prob: 0.00

RMLC - dTDP-4-dehydrorhamnose 3,5-epimerase
Paralog alert: 0.18 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: RMLC
RMLD - dTDP-4-dehydrorhamnose reductase
Paralog alert: 0.91 [within 20: 0.59] - ratio of genomes with paralogs
Cluster includes: FCL GALE GM4D HLDD QOR2 RMLB1 RMLB2 RMLD YBJS YEEZ YFCH YRAR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
113_I 90_K 0.69 0.00
10_D 194_D 0.66 0.00
146_I 92_A 0.62 0.00
14_L 96_G 0.62 0.00
10_D 119_T 0.60 0.00
126_D 42_N 0.60 0.00
38_I 286_V 0.59 0.00
28_E 103_S 0.58 0.00
156_D 8_K 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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