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OPENSEQ.org

YIAJ - YIAN
UniProt: P37671 - P37675
Length: 707
Sequences: 424
Seq/Len: 0.63
I_Prob: 0.00

YIAJ - HTH-type transcriptional regulator YiaJ
Paralog alert: 0.70 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: ALLR ICLR KDGR MHPR RHMR YAGI YIAJ YJHI
YIAN - 2,3-diketo-L-gulonate TRAP transporter large permease protein YiaN
Paralog alert: 0.62 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: YIAN
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
127_D 24_L 1.19 0.00
224_A 234_L 1.16 0.00
165_A 20_I 1.07 0.00
108_L 237_P 1.07 0.00
32_L 88_H 1.04 0.00
202_A 417_I 0.99 0.00
52_A 23_A 0.98 0.00
240_I 312_P 0.96 0.00
238_V 225_I 0.95 0.00
177_E 179_M 0.95 0.00
259_L 96_V 0.95 0.00
118_T 85_L 0.93 0.00
47_H 275_T 0.91 0.00
236_Y 355_I 0.90 0.00
195_P 251_V 0.90 0.00
210_A 306_Q 0.90 0.00
255_L 261_F 0.90 0.00
224_A 138_G 0.90 0.00
108_L 367_I 0.90 0.00
53_G 132_P 0.89 0.00
56_K 379_N 0.87 0.00
249_Q 405_S 0.85 0.00
192_T 147_A 0.85 0.00
122_S 59_I 0.84 0.00
139_T 123_V 0.83 0.00
108_L 293_T 0.83 0.00
183_I 149_I 0.83 0.00
104_A 179_M 0.82 0.00
227_V 16_I 0.81 0.00
54_L 301_V 0.81 0.00
94_A 338_I 0.80 0.00
95_L 321_V 0.80 0.00
43_C 303_D 0.80 0.00
63_L 33_F 0.79 0.00
256_L 244_A 0.79 0.00
250_V 416_L 0.79 0.00
60_H 343_L 0.79 0.00
227_V 249_L 0.79 0.00
268_N 207_Q 0.79 0.00
136_E 262_A 0.79 0.00
197_M 318_V 0.78 0.00
270_L 63_V 0.78 0.00
132_I 386_K 0.78 0.00
264_Q 292_I 0.78 0.00
48_L 80_D 0.78 0.00
259_L 307_P 0.78 0.00
137_P 103_I 0.77 0.00
86_K 394_R 0.77 0.00
73_T 305_L 0.77 0.00
227_V 262_A 0.77 0.00
123_S 66_G 0.77 0.00
168_H 29_A 0.77 0.00
201_L 234_L 0.77 0.00
225_V 242_A 0.76 0.00
53_G 254_V 0.76 0.00
170_D 346_L 0.76 0.00
57_S 361_F 0.76 0.00
35_I 100_A 0.75 0.00
73_T 175_I 0.75 0.00
224_A 359_V 0.75 0.00
202_A 26_L 0.75 0.00
239_S 307_P 0.75 0.00
233_R 338_I 0.75 0.00
204_I 354_P 0.74 0.00
53_G 271_A 0.74 0.00
188_R 271_A 0.74 0.00
168_H 136_A 0.73 0.00
57_S 158_I 0.73 0.00
227_V 245_A 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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