May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
YADG - YBHG
UniProt: P36879 - P75777
Length: 640
Sequences: 623
Seq/Len: 0.99
I_Prob: 0.00
YADG - Uncharacterized ABC transporter ATP-binding protein YadG
Paralog alert: 0.89 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC 		YBHG - UPF0194 membrane protein YbhG
Paralog alert: 0.80 [within 20: 0.13] - ratio of genomes with paralogs
Cluster includes: AAEA ACRA ACRE EMRA EMRK MACA MDTA MDTE MDTN YBHG YDHJ YHII YIAV YIBH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
22_R 159_Q 1.00 0.00
33_F 215_L 0.99 0.00
196_L 245_A 0.99 0.00
179_L 147_D 0.96 0.00
28_V 95_Q 0.96 0.00
131_N 306_I 0.92 0.00
174_S 117_V 0.90 0.00
279_G 31_D 0.90 0.00
94_T 90_G 0.90 0.00
194_H 291_V 0.90 0.00
220_M 275_G 0.89 0.00
245_L 255_A 0.88 0.00
94_T 68_A 0.87 0.00
191_L 282_P 0.84 0.00
213_E 68_A 0.82 0.00
218_T 122_A 0.81 0.00
51_I 325_F 0.81 0.00
164_T 321_V 0.80 0.00
49_G 106_R 0.80 0.00
28_V 91_V 0.79 0.00
174_S 162_L 0.78 0.00
218_T 226_L 0.78 0.00
21_L 139_K 0.77 0.00
214_L 159_Q 0.76 0.00
152_M 148_L 0.76 0.00
122_K 191_A 0.75 0.00
31_G 45_V 0.74 0.00
21_L 164_S 0.74 0.00
59_S 235_V 0.73 0.00
167_V 320_P 0.73 0.00
141_M 289_K 0.73 0.00
133_R 66_I 0.73 0.00
85_Q 320_P 0.73 0.00
286_R 70_Q 0.73 0.00
101_N 224_T 0.73 0.00
299_L 235_V 0.73 0.00
55_V 209_A 0.73 0.00
108_V 84_L 0.73 0.00
151_L 304_L 0.72 0.00
7_L 308_V 0.72 0.00
4_A 149_E 0.72 0.00
167_V 288_P 0.72 0.00
82_L 263_L 0.72 0.00
25_D 235_V 0.72 0.00
107_G 118_K 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 2.5548 seconds.