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OPENSEQ.org
L33 - S15
UniProt: P35871 - Q5SJ76
Length: 143
Sequences: 1203
Seq/Len: 8.53
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cO 3v2d6 3v2eO 3v2f6Contact Map
2j002j00O 2j016 2j02O 2j036Contact Map
4juw4juwO 4jux6Contact Map
4kix4kix1 4kiyO 4kiz1 4kj0O 4kj11 4kj2O 4kj31 4kj4OContact Map
4kj54kj51 4kj6O 4kj71 4kj8O 4kj91 4kjaO 4kjb1 4kjcOContact Map
3uyd3uydR 3uye6 3uyfR 3uyg6Contact Map
4gd13r8s1 3r8t1 4gd1O 4gd2OContact Map
3ohc3ohcO 3ohdO 3ohj6 3ohk6Contact Map
3knh3knhO 3kni6 3knjO 3knk6Contact Map
3ohy3ohyO 3ohz6 3oi0O 3oi16Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
8_K 50_H 0.83 0.00
52_V 79_R 0.81 0.00
50_R 83_E 0.80 0.00
22_A 3_I 0.74 0.00
4_E 58_M 0.70 0.00
43_C 54_R 0.66 0.00
48_V 65_R 0.65 0.00
7_I 58_M 0.63 0.00
8_K 18_F 0.60 0.00
10_L 54_R 0.60 0.00
27_K 51_H 0.59 0.00
33_K 75_P 0.58 0.00
22_A 73_E 0.57 0.00
46_H 53_H 0.56 0.00
3_S 71_Q 0.56 0.00
33_K 31_L 0.54 0.00
45_K 78_Y 0.54 0.00
50_R 22_T 0.54 0.00
30_T 17_R 0.54 0.00
25_K 50_H 0.53 0.00
33_K 40_S 0.52 0.00
14_T 33_T 0.52 0.00
11_L 66_L 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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