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OPENSEQ.org
L33 - L36
UniProt: P35871 - Q5SHR2
Length: 91
Sequences: 670
Seq/Len: 7.70
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d69 3v2f69Contact Map
2j002j0169 2j0369Contact Map
4juw4jux69Contact Map
4kix4kix14 4kiz14 4kj114 4kj314Contact Map
4kj54kj514 4kj714 4kj914 4kjb14Contact Map
2zjr2zjr14Contact Map
4btc4btd69Contact Map
3v223v2369 3v2569Contact Map
4gd13r8s14 3r8t14Contact Map
3knh3kni69 3knk69Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
14_T 21_G 0.95 0.02
53_K 31_K 0.91 0.01
37_R 25_V 0.91 0.01
47_T 29_N 0.88 0.01
33_K 24_Y 0.87 0.01
16_C 32_H 0.86 0.01
12_E 22_R 0.86 0.01
53_K 18_R 0.81 0.01
50_R 18_R 0.78 0.01
5_V 4_R 0.78 0.01
40_C 32_H 0.77 0.01
15_E 3_V 0.77 0.01
26_N 5_A 0.73 0.01
32_N 24_Y 0.72 0.01
53_K 22_R 0.72 0.01
7_I 12_D 0.72 0.01
28_R 24_Y 0.71 0.01
16_C 11_C 0.69 0.01
16_C 27_C 0.68 0.01
9_L 24_Y 0.68 0.01
44_R 5_A 0.66 0.01
17_K 15_K 0.65 0.01
39_Y 28_E 0.65 0.01
30_T 5_A 0.65 0.01
12_E 15_K 0.64 0.01
33_K 37_G 0.63 0.01
7_I 31_K 0.62 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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