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OPENSEQ.org
L33 - S20
UniProt: P35871 - P80380
Length: 160
Sequences: 1231
Seq/Len: 8.79
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cT 3v2d6 3v2eT 3v2f6Contact Map
2j002j00T 2j016 2j02T 2j036Contact Map
4juw4juwT 4jux6Contact Map
4kix4kix1 4kiyT 4kiz1 4kj0T 4kj11 4kj2T 4kj31 4kj4TContact Map
4kj54kj51 4kj6T 4kj71 4kj8T 4kj91 4kjaT 4kjb1 4kjcTContact Map
3uyd3uydW 3uye6 3uyfW 3uyg6Contact Map
4gd13r8s1 3r8t1 4gd1T 4gd2TContact Map
3ohc3ohcT 3ohdT 3ohj6 3ohk6Contact Map
3knh3knhT 3kni6 3knjT 3knk6Contact Map
3f1e3f1eT 3f1f6 3f1gT 3f1h6Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
28_R 35_T 0.75 0.00
8_K 9_N 0.69 0.00
32_N 82_S 0.67 0.00
27_K 38_K 0.64 0.00
54_I 66_A 0.63 0.00
53_K 79_R 0.59 0.00
48_V 51_E 0.58 0.00
32_N 61_S 0.58 0.00
53_K 25_R 0.58 0.00
39_Y 56_M 0.57 0.00
4_E 66_A 0.57 0.00
7_I 59_A 0.54 0.00
29_N 81_K 0.53 0.00
39_Y 55_I 0.53 0.00
27_K 62_L 0.52 0.00
28_R 23_R 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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