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OPENSEQ.org
L33 - S09
UniProt: P35871 - P80374
Length: 182
Sequences: 1008
Seq/Len: 5.70
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cI 3v2d6 3v2eI 3v2f6Contact Map
2j002j00I 2j016 2j02I 2j036Contact Map
4juw4juwI 4jux6Contact Map
4kix4kix1 4kiyI 4kiz1 4kj0I 4kj11 4kj2I 4kj31 4kj4IContact Map
4kj54kj51 4kj6I 4kj71 4kj8I 4kj91 4kjaI 4kjb1 4kjcIContact Map
3uyd3uydL 3uye6 3uyfL 3uyg6Contact Map
4gd13r8s1 3r8t1 4gd1I 4gd2IContact Map
3ohc3ohcI 3ohdI 3ohj6 3ohk6Contact Map
3knh3knhI 3kni6 3knjI 3knk6Contact Map
3f1e3f1eI 3f1f6 3f1gI 3f1h6Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
17_K 37_F 0.80 0.00
12_E 118_K 0.71 0.00
31_P 75_D 0.67 0.00
48_V 19_L 0.67 0.00
12_E 33_F 0.66 0.00
8_K 112_K 0.66 0.00
39_Y 52_A 0.65 0.00
30_T 63_I 0.65 0.00
33_K 117_H 0.65 0.00
6_R 106_A 0.64 0.00
27_K 41_V 0.64 0.00
39_Y 80_G 0.63 0.00
45_K 14_V 0.63 0.00
26_N 52_A 0.63 0.00
53_K 64_T 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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