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OPENSEQ.org
L33 - S03
UniProt: P35871 - P80372
Length: 293
Sequences: 957
Seq/Len: 3.62
I_Prob: 0.19
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cC 3v2d6 3v2eC 3v2f6Contact Map
2j002j00C 2j016 2j02C 2j036Contact Map
4juw4juwC 4jux6Contact Map
4kix4kix1 4kiyC 4kiz1 4kj0C 4kj11 4kj2C 4kj31 4kj4CContact Map
4kj54kj51 4kj6C 4kj71 4kj8C 4kj91 4kjaC 4kjb1 4kjcCContact Map
3uyd3uydF 3uye6 3uyfF 3uyg6Contact Map
4gd13r8s1 3r8t1 4gd1C 4gd2CContact Map
3ohc3ohcC 3ohdC 3ohj6 3ohk6Contact Map
3knh3knhC 3kni6 3knjC 3knk6Contact Map
3f1e3f1eC 3f1f6 3f1gC 3f1h6Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
9_L 76_V 1.21 0.19
39_Y 119_R 1.00 0.10
37_R 90_E 0.99 0.10
53_K 211_Q 0.95 0.09
46_H 134_I 0.93 0.08
49_H 129_A 0.92 0.08
6_R 15_T 0.89 0.07
23_T 133_A 0.86 0.06
31_P 184_Y 0.83 0.05
33_K 135_K 0.81 0.05
39_Y 160_A 0.80 0.05
50_R 128_F 0.79 0.05
36_L 99_V 0.79 0.05
44_R 189_A 0.79 0.05
32_N 91_L 0.78 0.04
50_R 149_A 0.77 0.04
24_E 66_V 0.77 0.04
44_R 54_R 0.76 0.04
27_K 6_H 0.76 0.04
30_T 120_V 0.75 0.04
22_A 190_R 0.75 0.04
32_N 42_L 0.73 0.04
37_R 157_I 0.72 0.04
50_R 88_R 0.71 0.03
46_H 135_K 0.70 0.03
50_R 65_A 0.70 0.03
24_E 20_S 0.70 0.03
28_R 88_R 0.69 0.03
53_K 163_A 0.69 0.03
32_N 198_V 0.68 0.03
31_P 133_A 0.67 0.03
27_K 125_E 0.67 0.03
12_E 5_I 0.67 0.03
39_Y 181_N 0.66 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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