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OPENSEQ.org
L33 - L34
UniProt: P35871 - P80340
Length: 103
Sequences: 775
Seq/Len: 7.83
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d67 3v2f67Contact Map
2j002j0167 2j0367Contact Map
4juw4jux67Contact Map
4kix4kix12 4kiz12 4kj112 4kj312Contact Map
4kj54kj512 4kj712 4kj912 4kjb12Contact Map
2zjr2zjr12Contact Map
4btc4btd67Contact Map
3uyd3uye67 3uyg67Contact Map
3v223v2367 3v2567Contact Map
4gd13r8s12 3r8t12Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
28_R 36_Q 0.98 0.03
22_A 11_K 0.94 0.02
33_K 10_R 0.80 0.01
12_E 23_R 0.80 0.01
10_L 8_N 0.76 0.01
26_N 3_R 0.73 0.01
53_K 29_K 0.69 0.01
36_L 37_K 0.68 0.01
35_E 37_K 0.67 0.01
49_H 32_K 0.65 0.01
53_K 13_A 0.65 0.01
54_I 10_R 0.64 0.01
35_E 30_V 0.62 0.01
10_L 10_R 0.62 0.01
6_R 16_H 0.62 0.01
2_A 40_W 0.61 0.01
14_T 42_L 0.61 0.01
46_H 25_P 0.61 0.01
32_N 44_P 0.57 0.01
44_R 24_T 0.56 0.01
11_L 24_T 0.56 0.01
7_I 29_K 0.56 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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