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NIKD - NIKR
UniProt: P33593 - P0A6Z6
Length: 387
Sequences: 226
Seq/Len: 0.62
I_Prob: 0.00

NIKD - Nickel import ATP-binding protein NikD
Paralog alert: 0.95 [within 20: 0.89] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
NIKR - Nickel-responsive regulator
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: NIKR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
79_I 101_L 1.14 0.00
24_L 119_R 1.06 0.00
77_R 84_A 0.99 0.00
52_I 47_Q 0.98 0.00
160_P 104_D 0.98 0.00
34_L 100_V 0.97 0.00
70_P 56_L 0.96 0.00
102_A 126_L 0.95 0.00
162_I 24_G 0.93 0.00
148_R 24_G 0.90 0.00
179_I 27_N 0.90 0.00
26_L 80_D 0.90 0.00
133_V 10_D 0.87 0.00
100_T 116_I 0.87 0.00
13_Q 49_G 0.87 0.00
51_G 50_T 0.85 0.00
146_L 73_S 0.84 0.00
220_V 100_V 0.82 0.00
212_A 32_I 0.82 0.00
183_L 31_A 0.81 0.00
22_V 86_L 0.80 0.00
135_K 82_S 0.80 0.00
195_L 65_R 0.79 0.00
64_I 111_F 0.79 0.00
23_S 77_H 0.78 0.00
11_A 49_G 0.78 0.00
127_L 72_V 0.77 0.00
31_V 86_L 0.77 0.00
40_S 72_V 0.77 0.00
48_A 114_D 0.77 0.00
46_C 59_V 0.77 0.00
156_L 21_Q 0.76 0.00
207_L 90_I 0.76 0.00
71_V 42_Q 0.75 0.00
103_R 96_L 0.75 0.00
127_L 71_I 0.75 0.00
49_T 84_A 0.74 0.00
210_D 115_V 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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