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OPENSEQ.org

MDTP - MDTN
UniProt: P32714 - P32716
Length: 831
Sequences: 1887
Seq/Len: 2.40
I_Prob: 1.00

MDTP - Multidrug resistance outer membrane protein MdtP
Paralog alert: 0.84 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: CUSC MDTP MDTQ TOLC
MDTN - Multidrug resistance protein MdtN
Paralog alert: 0.81 [within 20: 0.13] - ratio of genomes with paralogs
Cluster includes: AAEA ACRA ACRE EMRA EMRK MACA MDTA MDTE MDTN YBHG YDHJ YHII YIAV YIBH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
431_A 146_E 2.60 1.00
223_S 146_E 1.85 0.96
227_H 142_P 1.57 0.90
231_A 150_S 1.30 0.74
431_A 148_F 1.02 0.45
435_R 142_P 1.01 0.44
432_A 148_F 0.84 0.24
219_K 71_K 0.82 0.22
359_L 219_V 0.79 0.20
471_L 202_T 0.78 0.19
446_A 271_S 0.78 0.18
109_A 219_V 0.73 0.15
223_S 148_F 0.73 0.15
109_A 265_A 0.72 0.15
155_L 93_A 0.72 0.15
254_G 75_L 0.71 0.14
220_A 148_F 0.71 0.14
416_A 51_V 0.70 0.13
229_L 143_L 0.69 0.12
208_E 127_R 0.69 0.12
432_A 153_D 0.69 0.12
428_A 148_F 0.68 0.12
383_M 147_G 0.68 0.12
372_N 280_K 0.68 0.11
215_D 280_K 0.67 0.11
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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